| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_25463 |
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| Symbol | |
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| ID | 5005378 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009368 |
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| Strand | + |
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| Start bp | 42063 |
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| End bp | 44097 |
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| Gene Length | 2035 bp |
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| Protein Length | 570 aa |
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| Translation table | |
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| GC content | 60% |
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| IMG OID | 640420799 |
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| Product | predicted protein |
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| Protein accession | XP_001421192 |
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| Protein GI | 145353806 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02345] T-complex protein 1, eta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.261555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000278196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | CGCGAACGCG CGAACGCGAT GGCGGCGCCG ATGGTGCGCA TGCCCGATGG GCGATTAATA
GTGCGTGTCG CGACGGCGAC GGCGCGGACG ACGCGACGCG CGACGCGCGA AGAGACGCGA
TCGGAACGCG CGCGCGCGAT GGCTCGCGAC GGCGGATGAA GAGGATGATT TCGAGCGATG
CGACGTCGCG CGAACGACGA GGGGGGGGGC GCGCGACGGA GGAGGGGTCG AAGAATTTGT
GTGCTTCGAG CGCGGACGTC GCGCGGGACG TCGGCGCGAC GCGGGAGACG CGAGGCGGCG
ATGATGGTGA TGATGAAGAC TGAAGACTGA AGACTGACGC TCGCGAACGA ACGCGCGAAC
GCAGCAACCG CAAATCGTGC TGCTCAGGGA AGGCACGGAC ACGTCGCAAG GACGCGGACA
GTGCGTGTCG AACATAAACG CGTGCTGTGC GGTGGCGGAT ACGGTGCGAA CGACGCTTGG
ACCGCGAGGA TTAGATAAAC TCGTGCGAGA CGCGCGAGGA AACACGACGA TTTCCAACGA
CGGCGCGACG ATTATGAAAC TGTTGGAGAT TGTGCATCCG GCGGCGAAAA CGCTCGTGGA
CATCGCGAGA GCGCAGGATA GCGAAGTGGG GGACGGGACG ACGACGGTGG TGATACTGGC
GGGGGAGCTG TTGAAGGAGG CGAAGACGTT CATCGAGGAC GGCGTGCACC CGATGAATGT
CATCAAGTCG TTTCGAGAGG CGTGCGATTT GGCGACGGCG CGCGTGCGCG AATTGGCGAC
GTCCATCGAA GGGAACAGCG CGGAGGAGAA GGATGAACTT TTGAAGAAAT GCGCGATGAC
GACGCTGAGC TCCAAACTTG TAGGAGGGGA GAAGGACTTC TTTGCCGACA TGTGCGTCAA
GGCGGTGCGC TCGCTCGATC AAGACTTGTT GGACCCGAAG ATGATTGGCG TGAAAAAGGT
CATGGGCGGA GGGATGACGG ATTCGTTCTT GGTGGATGGC GTGGCGTTTA AGAAGACGTT
CGCCTACGCC GGCTTCGAGC AAATGACGAA GAGCTTCAAA AAGCCGAAGA TTTTGGCGCT
CAACATGGAG CTCGAACTGA AGAGCGAAAA AGACAACGCC GAGGTGCGCC TGAGCGATCC
GACCAAGTAT CAAGAAATCG TTGACGCTGA ATGGAACATC ATTTACGAGA AGCTCGACAA
ATGCGTGGCG TCGGGAGCGA ACATCATTCT GAGTAGACTC GCGATCGGGG ACTTGGCGAC
GCAATATTTC GCCGACCGCG GATTGTTTTG CGCCGGTCGC GTAGACGCGC AGGATTTGGA
ACGCGTGACG CGCGCCACCG GCGCGCCGGT GCAGACCACG GTGAACAACA TCACGGACGC
CCAGCTCGGA TCGTGCGAGT TGTTCGAAGA GATTCAAGTC GGTAACGAAC GGTACAACAT
TTTTAGAGGT TGTCCGCAGG CGAAGACATG CACGCTCATC TTGCGCGGCG GCGCCGAGCA
ATTCATCGAG GAGGCGGCGC GCTCGCTCAA CGACGCCATC GAAATTGTTC GCCGCGCGGT
GAAGAACGCG GCGATCGTCC CTGGTGGCGG TGCGATCGAT ATGGAGTTGA GCAAGTACTT
GCGCAACCAC GCGCGCACGG TGGCGGGCAA ATCTCAGCTC TTCATCAACG CCTTTGCCAA
AGCTTTAGAA ATCATCCCGC GACAGCTCTG CGACAATTCC GGGCACGACG CGACCGACGT
GTTGAACAAG CTCAGACAAA AGCACGCGGG CGATGACGGG GCGAATTTCG GCGTCGATGT
CAACGGAGGT GGCATCTGCG ACACGCACGA ACGCTTCATC TGGGAACCGA GCCTGGTGAA
AATCAACGCC CTGAACGCCG CCACCGAAGC GACGTGCTTG ATTCTCTCCG TGGACGAAAC
CGTGAGAAAC CCGCGAAGCG AAGGCGCGGA TGAAGGCATG GGTGGCGGCG GTGGTCGGGG
CATGCCGATG GGAGGTAGAG GAGGTGGTCG CGGCCGGGGT CGCGGCCGAC GATAG
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| Protein sequence | MAAPMVRMPD GRLIQPQIVL LREGTDTSQG RGQCVSNINA CCAVADTVRT TLGPRGLDKL
VRDARGNTTI SNDGATIMKL LEIVHPAAKT LVDIARAQDS EVGDGTTTVV ILAGELLKEA
KTFIEDGVHP MNVIKSFREA CDLATARVRE LATSIEGNSA EEKDELLKKC AMTTLSSKLV
GGEKDFFADM CVKAVRSLDQ DLLDPKMIGV KKVMGGGMTD SFLVDGVAFK KTFAYAGFEQ
MTKSFKKPKI LALNMELELK SEKDNAEVRL SDPTKYQEIV DAEWNIIYEK LDKCVASGAN
IILSRLAIGD LATQYFADRG LFCAGRVDAQ DLERVTRATG APVQTTVNNI TDAQLGSCEL
FEEIQVGNER YNIFRGCPQA KTCTLILRGG AEQFIEEAAR SLNDAIEIVR RAVKNAAIVP
GGGAIDMELS KYLRNHARTV AGKSQLFINA FAKALEIIPR QLCDNSGHDA TDVLNKLRQK
HAGDDGANFG VDVNGGGICD THERFIWEPS LVKINALNAA TEATCLILSV DETVRNPRSE
GADEGMGGGG GRGMPMGGRG GGRGRGRGRR
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