| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_18182 |
|---|
| Symbol | |
|---|
| ID | 5005412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009368 |
|---|
| Strand | - |
|---|
| Start bp | 582870 |
|---|
| End bp | 585119 |
|---|
| Gene Length | 2250 bp |
|---|
| Protein Length | 749 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640420833 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421509 |
|---|
| Protein GI | 145354473 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3889] Predicted solute binding protein |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.28956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00382688 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACG ACGCGCCGAT CGCGGACGTC GGGACGACGC GGCGAAACGC GGCGAAAACG
ATCGAAGAGG CGATGGCGAG CTCGACGATC GCGCGGTTGG CGTGGAGCGG GTGGACGCAC
GTGACGAGAC GACGAAGGGA GACGAACGCG CGCGCGACGG CGCTGTGGCG GGATCGGTCG
CGACGAACGA GCGCGCGAAC GCTGATCGCG TGGGCGCGAA TCACGAAGTT TAACGCGAAA
CGACGGGAGA TGACGCTGGA GCGATCGAGG GCGCAGCGGG AACACGCGAA AAAGTTGAGG
ACGCTGAGGG AGTGGAAGGC GAGCGTGCGA CGGACGAGGG AGGCGAGACG CGACGTGATT
CACAAGTATT TGGTGTGGCG GGCGAAGAAG TTCTTGAGGC ATTGGCGACA GGCGACGGAG
GAGAGCGTTG AGGCGCGAGG GGGACGGAAG CGCGCGGTGG AACCCGCGGC GGCGGCGGAG
CCGAGCGCGG CGCCGACCAA GGCGGCGGCG GTTCGCCGCA GGGAACGACA CGCCACCGTG
AGCGTGGGCG ACATGAAGAG CAGATTGTGG ACCAAGGCTG ACCCCGCGGC GGTGCCGATG
CCGGTGTCAC ACGTCGTGGA AGAGATTGAA GCCGCGGTGA TGGTCGAACG AACGACGTCG
GGGACGTCGA CGACGTCCAC GACAACGACG TCCGCGCCTC AAACGCAGCG CGCGCAAGTT
CGACGACGGA AAGTCGTCGT GCGCGAGTCC GGAGAAAATG AAGCGGAGGA AACGGTAGTC
GTGACGAAGA AGAGTGCCGA TGCGAAGAAG ATGACGAAGA CGAAGACGAC GAAGCTGGTG
GACGCCACGA CGATGACGCC GGTTGCGAGC GCGGTCTCGC AGCCGTCGCC GCGAACGTCA
TCGTCATCGT CGCAGCACAT GTCGACCATC ATTATAGTCG TCGTACTGTT GGCGATTTTC
GGCGCCATCG CGCTCGCGTC CATCTTGACT GGCGTCTCGC CTTCCTTTGT CGGCGCCGGG
GCGACCTCCG TCGTGCGCCA GCATCTCTCC GAGGCGCAAC GAAACGTGAC GATTTTAGCG
CGTGCGTCGG CGATGCAGCG AAGAGAATTA GAGGCGTGTC GTACGTTCGG TGGCGGCGTG
CCCGACGCGA GTCAAAACGC CGCAATCGCT TCCGCGGAGG CCAAGGTTTC AGATTCCGTC
GTCCAAGTTG CCGATTTAGA GGTGAAACTC ACCAAGGCTA AAGCCGACGT CGCCGCGGCG
CAGAGCGCAC AAAAGTTAGC CGAAGACCGA TTCAATCGCT TAGGTTCGTC AGCGATGACT
GTGGCGCAGT TACAAGAGTC GTTACAAAAG ATGACGACGC GAGCGACGTA TTGCGAGTCC
ACGTCGGCGC AAGCGTTGAA GCTCAAAGCC GCCAAAGACA TCGCGACGGC GCGCGCCGAG
AGTGCGGAGA AAGACGCCGC GGATACGAAG TCGAAGTTGA CCAAGACTAA GACGCACTTG
TTGGCGGCGC AGCGCTCGTT GACGCAAACC GTGGATGTGG CGAATGAGTG CAGGTACCAA
ATCGGGAAGC CCGCGTACGT GCCGTCGTAT CACTCCAACT CGTCCCTGCT CCGCGTCATT
GCGGACATGT TCCCCGCGTT TTCGTGGTTC TTTTCATCCT CGGCGTTGTT GTTTTACGTT
GTGTGCTCGT ATGCGTACTA TTTGCGCGCG ATGGTGGCAT CATTAGTTGG TGAAAGAGAT
ACGCTCGTCG GTGAATTGGC GAAAATTCGC ACGCGAGGCG TGGCGCCAAA CCGGCCGCAT
CTCGAGCACA CCAGGGTGAT GCACGAGCAT AGCGCGGAAA GTAGCGGTGC TGACGATGAT
TCGCCATCAG TCGGTAAGAC GTCGTCGTTC GATCGGAAGC GTTCCCGCAG TGTGAGCGAC
ATCGGAAAAG ATGGCGCGGA GACGTCGCAA AAGAAGACCG CGACGGCGAG CGACGTCAAG
GATAACGACG AAGAGAACGA GTCCGCAGCG ACGAGAGTGG AGGAAGTCAC AAGCGCTGAA
GATTTGAGCA AGGAGCAAAC AGAGCGCGCG CACAAACTCA TCGAAAGGTG GGCTGAGAAG
TCAGCCGACG ACGAGATTAC GGGCGAACTC GATCGCATCC GTCGACTCGT CGAATTGGAA
GACGAGCGCG AGCGATTAGA GGAGGAGTCG CAGCTCGAGC GGCTTAAGCG CCAGATTGAG
TTATCTGCAA ATGATACGCC GTGGCTTTAA
|
|---|
| Protein sequence | MNDDAPIADV GTTRRNAAKT IEEAMASSTI ARLAWSGWTH VTRRRRETNA RATALWRDRS
RRTSARTLIA WARITKFNAK RREMTLERSR AQREHAKKLR TLREWKASVR RTREARRDVI
HKYLVWRAKK FLRHWRQATE ESVEARGGRK RAVEPAAAAE PSAAPTKAAA VRRRERHATV
SVGDMKSRLW TKADPAAVPM PVSHVVEEIE AAVMVERTTS GTSTTSTTTT SAPQTQRAQV
RRRKVVVRES GENEAEETVV VTKKSADAKK MTKTKTTKLV DATTMTPVAS AVSQPSPRTS
SSSSQHMSTI IIVVVLLAIF GAIALASILT GVSPSFVGAG ATSVVRQHLS EAQRNVTILA
RASAMQRREL EACRTFGGGV PDASQNAAIA SAEAKVSDSV VQVADLEVKL TKAKADVAAA
QSAQKLAEDR FNRLGSSAMT VAQLQESLQK MTTRATYCES TSAQALKLKA AKDIATARAE
SAEKDAADTK SKLTKTKTHL LAAQRSLTQT VDVANECRYQ IGKPAYVPSY HSNSSLLRVI
ADMFPAFSWF FSSSALLFYV VCSYAYYLRA MVASLVGERD TLVGELAKIR TRGVAPNRPH
LEHTRVMHEH SAESSGADDD SPSVGKTSSF DRKRSRSVSD IGKDGAETSQ KKTATASDVK
DNDEENESAA TRVEEVTSAE DLSKEQTERA HKLIERWAEK SADDEITGEL DRIRRLVELE
DERERLEEES QLERLKRQIE LSANDTPWL
|
|---|
| |