| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_18085 |
|---|
| Symbol | |
|---|
| ID | 5005569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009368 |
|---|
| Strand | + |
|---|
| Start bp | 324011 |
|---|
| End bp | 325306 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640420990 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421263 |
|---|
| Protein GI | 145353957 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0963143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000212922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAGG CGGGGACGTC GACGAAGGCG GGACGAGGCG CGGATGGGCG CGAGAGGTTC
GTCGTCATTC GCGCGATGGG GCTGAGCGTG GACGGGAAGG TGGAGGCGGT GGTGGAGAGC
GAGGCGTTTC CGACGCTCGA GGCGGCGATC GGGCACAGCG AGTACTTGGC GCAGACGGTG
AGAGCGCGCG GGGGGGTTCG GGGGAACGTG GGACGAAACG GGGGGAAGAA AGGGATGAAG
GCGTCGCGAA CGACGATTTG CGAGTTGCCG GTGGACACGC AGGTGTGGCA CGTGACGCCG
ACGAATATTC CCGGGCCGGC GTATCGAAAC GAGGGGCAGC TCATGGTGAT GCTGCTGTCG
AGTCTGTGCG GACGCGTGGT GTCGAAATCG CGCAATGGGG TGTTGGATGA GTCGGAGTTC
GCGTACAACA ACGGCCACGG CGTGCGGTCG GCTCGCAACG GGGGCGACGC GGAGGCGCCA
CAAATTGCGG ACGGCATTCC TTACGTCAAA GCAAAGATTT TCGGCCAGAA AACGGCTGAC
CCATTCATGT TGCGCCCTAA CATCTCCAAG GCTGCGTTCA GAACGCTCCT CCTGCGCGCG
GTGGGTAAGT ACCTGGCCGA CGATCGCGAG CCGTACCCGG TGCTGGCGAA ATCAGACGTG
CAGCTTCAAG TCGCGCAAGT GGCTCACGGA GTCCAATACC ACGTTCTCGC GATTCGTGCG
CTTGGACATT CCGCCGCGGA CTTTTCGATG TCCATCGATG ATCAAGGTCG AACCTTTGTG
CGCGCCGATC CGGCGCAACC GCCAAACTCG AACCCGAAGT TGGGGCGGCC GTTCGAGCTG
TTGTGTCAGT TCCCTTCCCT CGTGCACTTG CAAACGTGCC GCTGCATTTA TCAAGACGAC
GTACTGTACA TCATTGTGTA TCCTCGTAAC GCCAAGTCGC GATCACTTCG TTTGTCTTCA
GCAGAAATTA GAAACACGTC TTTGCCGGAA AGCATTCGAA ACACCGCGAC GGGCGCCGGC
GTGGAAAAGG CCAACGGACC TTCGTTTCCG CGCGAAGTAG GGATCGAGGA TGGAACAAAT
AGCGCTAGAC CGGGCGATGA GATTGCCTTG GCTACCCTTG GTGGCGCTTT TGGGAAGAAC
GAAGATGACT CTGACTCCGA CAACACGGAT GACTTCTCGA ACGACGAGGC AGAGGAGCCA
CGTGCCAAGA CTGCGGCGCC CGAGGTTGAT GAGAAGACGA TAGATTTACC AGACGAGGAT
GTCGACAGCG AGGTGGAAGA GCCGATGCCC GAATAG
|
|---|
| Protein sequence | MSQAGTSTKA GRGADGRERF VVIRAMGLSV DGKVEAVVES EAFPTLEAAI GHSEYLAQTV
RARGGVRGNV GRNGGKKGMK ASRTTICELP VDTQVWHVTP TNIPGPAYRN EGQLMVMLLS
SLCGRVVSKS RNGVLDESEF AYNNGHGVRS ARNGGDAEAP QIADGIPYVK AKIFGQKTAD
PFMLRPNISK AAFRTLLLRA VGKYLADDRE PYPVLAKSDV QLQVAQVAHG VQYHVLAIRA
LGHSAADFSM SIDDQGRTFV RADPAQPPNS NPKLGRPFEL LCQFPSLVHL QTCRCIYQDD
VLYIIVYPRN AKSRSLRLSS AEIRNTSLPE SIRNTATGAG VEKANGPSFP REVGIEDGTN
SARPGDEIAL ATLGGAFGKN EDDSDSDNTD DFSNDEAEEP RAKTAAPEVD EKTIDLPDED
VDSEVEEPMP E
|
|---|
| |