| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_17975 |
|---|
| Symbol | |
|---|
| ID | 5005522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009368 |
|---|
| Strand | - |
|---|
| Start bp | 44201 |
|---|
| End bp | 46233 |
|---|
| Gene Length | 2033 bp |
|---|
| Protein Length | 678 aa |
|---|
| Translation table | |
|---|
| GC content | 65% |
|---|
| IMG OID | 640420943 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421374 |
|---|
| Protein GI | 145354188 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.796717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000290426 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGAA GCGGCGACGG ATGGGACGAC GACGCGTGCC TGGCGTGCGC GTGCGCGGTG
ACGAAAAATA ATGATGGATT CAAGTGGTCG GACGCGGAGG GCGGGGACGG GGTGGAGAGC
GTCGCGCGAA GGATGTCGCC GAGCGGGCGG TGCTCGTGGT GCGGCAAAGA GACGCGACAT
CGAGTGACGC GAGCGACGGG GAGAAGAGGG ACGTATCTGA GTCACTGCGC GCGGTGCGCG
AGGGCGACGC ACAAGTGCGA ACGATGCGCG GAGGGATTCG CGAAGATCGG GGACGGGAGG
TGCGCGAAGT GCGCGGGATG GGTGGAGACG TGGACGACGA GCGAGGCGTT CGCGGCGGCG
ACGAGACGCG TCGCGTGGTG CTCGTGGTGC GGGGAAAAGA GTTCGCACGT CAGGCGTGGG
ACGCGCGGGA GCGACGCGTA CGAGTGCATG GTGTGTGGGG GGGGGACGGC GGCGTGCGAG
CGGTGCGGCG AGGACGCGGA GGTGATGCGC AAGCGCTCGC GGCCGGGTGG GGGATCGTGC
GCGAGGTGCG CCGCGGCGGA GACGACGACG CGCAGAATAA ACATCGGTGG ACACGTGTCC
GTGCCCACGA TCGGGGCGTT GGCGAAGGCG TTTAAGCGCG CGCTGAGCCG CGGGGACGAC
GCGGCGACGG CGACGGCGTC GGCGGAGGAG ATCGCGCGCG GGTGGGATTT GCGGCTGGCG
AAACGCGAAG CCGCGGACGA GCGCGCGGGG TTCATATTTG ACGTTCTCGA CCGCGAGAGC
GATTACCGAG ACAAGGCGTA CCGCGCCGGT TTGATACGCC CGTTCTTACT CCTCGCCACG
CTTCCTCCGC GCGAGCGCGT TCGACTCGGC ATGCGGTTGG GAGTGACGCT GTGTCGAAGC
TCGGCGTACT TGGATCCGCA CGCCGAGGCG TGGAAGTTGC TCAGGGATCC GATGTGCGGA
CTGCAGACGA GAGGCGGGAG CGTGTCGCGC GTCGTCGAAA AAGTCACCGG CGTCGGACGC
GGGGCGAATT GGATCGATAT ATTGTACTCC GCGCTGACCC TCGGCGCGGA CACCGGAAAG
TGTCCGGCGA CGGATCCGAG CGAGCTCGAC GCGCTTCCGA AATTTCGTTC AACCGGTCAC
GCGATGTTTG CTCTTCGCGT CGCATCGCAC CCGTCGTTGA GCGCATTTGA AGTCGCGACG
CTGCGTCTGG TCGGTCGCGC GCAACGCGGC CGACTCGCAC CGGCGTCGAC GATTGTTCTG
GACGGCGTGT GCCGACATCC TCGCATGGCG ACGCTGCGGT CGCGATTAGC CAAGGCGTAT
CCGCGCCACG CGGACGAAGT TTCCCGACAC GCCGTGACGT GCGCGTTCGC TTCGTCAGAA
TGGGCGTCGA CGATGCGACC ATCGAGTCCG GGAGATGTCG AAGAGACGGC GGAAGAAGTG
TTCGGAATGT TGCTCGACGG CGCGCCGTTT TCGCGCCGCT GCGGCGCCGC GGACGAAGAC
GTACTCGACG AAAGCGCCGA CGCGCACTTG TCGCGAGGCG CACCTTCGTT GCTAGGATCT
TTAGCCTCCG CGACGTCGAT TGGACTCGCA TCTTACGCCG CCGCTCAATT TGCGCCGAAG
AAATTCGCCG TGCTCACGCC CAGGGACATC ATGGATTTGA CGACGGGCGT TCGCACGCCG
ACGCTGACGT CGTCGGGCAT TTTCGAACCG GTGGCGGTGA TGCTCATACA CAACGTCCTT
CTCGCCGCGA GAAACGTGCA TGTGGACGAG CACTTGCCGG ACGAAGCGTC GCGATTGTCG
AGAGACGCTC TGATGTCCGC ACAGTCGCCA TCCGTTGCCG CGCCGACGCC CGAACCGGCG
AGCGAGACGA GTCCAGGGTC GCCCATTGAC GACGAACCCG GTTCGCCCTG GGCGCCTAAA
TACGCGCATC TTCAAGACGA GGACGCGAAA GTGCGTTTAG AAGAATTAGA AGAGGCTGAG
GAGTCCGCGG CGATGCTCGC GAGATACATC AACGCGTTGG ATACCTCGGA TCT
|
|---|
| Protein sequence | MARSGDGWDD DACLACACAV TKNNDGFKWS DAEGGDGVES VARRMSPSGR CSWCGKETRH
RVTRATGRRG TYLSHCARCA RATHKCERCA EGFAKIGDGR CAKCAGWVET WTTSEAFAAA
TRRVAWCSWC GEKSSHVRRG TRGSDAYECM VCGGGTAACE RCGEDAEVMR KRSRPGGGSC
ARCAAAETTT RRINIGGHVS VPTIGALAKA FKRALSRGDD AATATASAEE IARGWDLRLA
KREAADERAG FIFDVLDRES DYRDKAYRAG LIRPFLLLAT LPPRERVRLG MRLGVTLCRS
SAYLDPHAEA WKLLRDPMCG LQTRGGSVSR VVEKVTGVGR GANWIDILYS ALTLGADTGK
CPATDPSELD ALPKFRSTGH AMFALRVASH PSLSAFEVAT LRLVGRAQRG RLAPASTIVL
DGVCRHPRMA TLRSRLAKAY PRHADEVSRH AVTCAFASSE WASTMRPSSP GDVEETAEEV
FGMLLDGAPF SRRCGAADED VLDESADAHL SRGAPSLLGS LASATSIGLA SYAAAQFAPK
KFAVLTPRDI MDLTTGVRTP TLTSSGIFEP VAVMLIHNVL LAARNVHVDE HLPDEASRLS
RDALMSAQSP SVAAPTPEPA SETSPGSPID DEPGSPWAPK YAHLQDEDAK VRLEELEEAE
ESAAMLARYI NALDTSDL
|
|---|
| |