Gene OSTLU_27227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_27227 
Symbol 
ID5005002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009367 
Strand
Start bp415789 
End bp417147 
Gene Length1359 bp 
Protein Length452 aa 
Translation table 
GC content62% 
IMG OID640420423 
Productpredicted protein 
Protein accessionXP_001420996 
Protein GI145353388 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.689197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCCG TGCGCCGCGC GGGCGACGCA GACGCGTCAA CGAGCGCGAC GGTGAGGGAT 
GGGGAGGTGT TTTCGAAGAA TTTGTACTTT GAGCACCCGT CGACGACGGC GCGAAGCGCG
AGAGCGACGG AAGACGCGAT GCGAGCGCGC GGCGTGCGCG TGGTGCGAGG GGCAGATGTG
CCCAAAATCG TGACGACGTT CGAGGAGGCG TCGTTCCCGG CGTACGTGAT GGACGATTTG
AAGGAGCGCG GTTTGGCGAC GCCGACGCCG TGTCAGTGCC AGGCGTGGCC GATCGCGCTG
AGCGGACGAG ACTTGATCGC GGTCGCGGAG ACGGGGTCTG GAAAGACGTT GGCGTACGTG
TTACCCGCGA TCGTGCACGT GAACGCGCAG CCGGTGCTGG AGAAGGGGGA GGGGCCGATC
GCGTTGGTGC TCGCGCCGAC TCGAGAGTTG GCGAGTCAAA TCGAACTCGA GGTCGCCAAA
TTCGCGGCGT CGAGCGAGAT CAAGCACGCG TGCGTTACCG GTGGCGTCCC AAAAGGTCCG
CAAATAAAAG CGTTGAAATC AGGAGGGAGC GAGATTTGCG TCGCGACGCC GGGCCGCCTG
ATTGATTTTT TGGACGGCGG GCAGACGAAT TTGCGACGAA CGTCGTTCGT CGTCCTAGAC
GAGGCAGATC GAATGCTCGA CATGGGTTTC GAGCCGCAGA TTCGTCGAAT CATCGCTCAA
ACGCGCTGCG ATCGCCAAAC GCTCCTGTTC ACCGCGACGT GGCCGGTGGA GGTGCGAGAA
GTGGCGAGAG AGTTTATTCG CAACGACCCG GTGGAGATGC GCGTCGGCGG CGCGGGCGAC
GGTTTGCTCG CATCGAAAAA CGTCGAACAA ATCGTGCACA TAGTCGAAGA CGCGGAGGCA
AAGTACGCTA AACTCATGGA TATTTTAGAA GAAGAGATGG ACGGGAGCTC GATCTTGGTC
TTCGTCGAGA CCAAGGCGCT CGTGGACCAG CTGACGCGTC GACTCCGTTC GGAGGGTTGG
CCCGCGCTCG GCTTGCACGG CGACAAAGAA CAGAAAGAGC GCGACTGGGT CCTCGAAGAA
TTTCGCGCCG CGCGATCGCC GATCATGATC AGCACCGACG TTGCCAGTCG CGGCTTGGAC
GTCGTCGGCG TGAAGCTCGT CGTCAACCAC GACTTTCCGA AGAGCGTCGA GGAATACGTC
CACAGAATCG GTCGCACCGG TCGCGCCGGA CGCAAAGGCA AATCGCACAC GTTCTTCTCT
ATCTTGCGCG ACGGCAAGCA CGCGCGAGAG CTCGCGCACG TCTTACGCGC GTCGAATCAA
TCGATCCCGC GCGCTCTCGA GGGCGTCGTC GCCGACTGA
 
Protein sequence
MDAVRRAGDA DASTSATVRD GEVFSKNLYF EHPSTTARSA RATEDAMRAR GVRVVRGADV 
PKIVTTFEEA SFPAYVMDDL KERGLATPTP CQCQAWPIAL SGRDLIAVAE TGSGKTLAYV
LPAIVHVNAQ PVLEKGEGPI ALVLAPTREL ASQIELEVAK FAASSEIKHA CVTGGVPKGP
QIKALKSGGS EICVATPGRL IDFLDGGQTN LRRTSFVVLD EADRMLDMGF EPQIRRIIAQ
TRCDRQTLLF TATWPVEVRE VAREFIRNDP VEMRVGGAGD GLLASKNVEQ IVHIVEDAEA
KYAKLMDILE EEMDGSSILV FVETKALVDQ LTRRLRSEGW PALGLHGDKE QKERDWVLEE
FRAARSPIMI STDVASRGLD VVGVKLVVNH DFPKSVEEYV HRIGRTGRAG RKGKSHTFFS
ILRDGKHARE LAHVLRASNQ SIPRALEGVV AD