| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_27115 |
|---|
| Symbol | |
|---|
| ID | 5004948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009367 |
|---|
| Strand | + |
|---|
| Start bp | 230308 |
|---|
| End bp | 231066 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640420369 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420940 |
|---|
| Protein GI | 145353266 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.000197052 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0145567 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGCGT GCGCGGTGGC GGTGACGGCG ATGGTGATGC CGGAGAGCGC GCTCGCGGCG
AAAGCGGCGG CGGTGGCGTC GTCGAGCGAG GGCTTGTTGG CCAAGGCGTT GTCGTGGGTG
ATGCACTTGG ACAAACACCT CGCCGAGTTG TTCGTGAGTC AGGGGATGTT TGCGTACGGG
ATCTTGTTCG CGATCATCTT CGCCGAGACT GGGTTCGTGG TGACGCCGTT CTTGCCGGGG
GACTCTCTGC TGTTCGCCAC CGGCGCGCTC GGCGCGCTGG GCGTGGTGAA CTTTCCGTTG
ACGTGCGCTC TGCTCTTCGC CGCGGCGACG CTCGGGGACA CGGTGAACTA CTCCATCGGC
TCTTACGTCG GTGCGAATTT CATGGAGACG CATCCGAAAA TCTTTCCTCC TGAATATATC
GCGAAAACAC GAAAGTTTTA CGATCAGTAC GGTGGTAAGA CGGTGGTCCT CGCGCGCTTC
TTCGTAATCG TGCGCACGTT TGCGCCGTTC GTCGCCGGCG TGGCAAACAT GAACTATTCC
AAGTTCATCA CGTACAACGT TGTGGGTGCC GCGTTATGGA TCGCGAGTTT CATGGGACTG
GGTTACTTTT TCGGCGCCAT TCCCGCGGTG CAGGAGAACT TTGCCCTCGC CGTTGCCGGC
ATCGTCGTTC TCTCGCTCGT GCCCGTCATC GTAGAAATTA TTCAACACGC CACGGGCAGT
AAAGGGGACG AGAGCGAGAC CGCCCCGGCC GCGACGTAA
|
|---|
| Protein sequence | MVACAVAVTA MVMPESALAA KAAAVASSSE GLLAKALSWV MHLDKHLAEL FVSQGMFAYG
ILFAIIFAET GFVVTPFLPG DSLLFATGAL GALGVVNFPL TCALLFAAAT LGDTVNYSIG
SYVGANFMET HPKIFPPEYI AKTRKFYDQY GGKTVVLARF FVIVRTFAPF VAGVANMNYS
KFITYNVVGA ALWIASFMGL GYFFGAIPAV QENFALAVAG IVVLSLVPVI VEIIQHATGS
KGDESETAPA AT
|
|---|
| |