Gene OSTLU_39292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_39292 
Symbol 
ID5004837 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp136958 
End bp137737 
Gene Length780 bp 
Protein Length243 aa 
Translation table 
GC content61% 
IMG OID640420258 
Productpredicted protein 
Protein accessionXP_001420596 
Protein GI145352533 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.240986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACG ACGTCACCGT GGTCGGCACG GATACGCAAA TCGCGCAAAT CAAGTTGAAA 
CCCGGGGAAG AGGTGGCGGC GAGTCCGGGG GCGATGTGCT ACATGAGCTC AAACGTCATG
TCGCTGACGT CGCTCGGTCC GGGCGGGTTG CCGCGCGCCA TCATGCGCGC CCTGGCGGGC
GAGCCGTTCT TCATCAACAC GTTTAGGAAC TTAGGCAGCG TGGAGGGATA CATCGCCGTC
GGTGGCCTGG AACCGAGCGA TAAAATCGCG GTGATCGAAC TCAAAGATGA CACGAAGCAC
GACATTTTGT GCGCGCGCGA TTCTTTCATG TGCTCCAAGG GAAACATACG AATCACCGCC
GCCGCCGCGC TGCGCACGAC GGAGAACGAC TTCGCATCCT TCGCCGACAT GCTCAAGTAT
CGCATCGGTT TCGCCGCGCG TTTGGTGCTC TCCAAGGGCA ACAGCATCTT CAACGGCGAA
TGGCTCATCG GCAACGGCAC GGTGTGCATC AACGGCAAGG GCACCGTCGT CCGACGAACG
CTGAAAAAAG ACGAGGAGAT GGTCGTCGAC GCGCGCGCCG TCATGGCTCT CGAGCGTTCT
GTCGGCTACG ATCTCGAGAT TCAAAGCTCT CCCCTGGCCG CGGTTTTCGG CGGCGCGGGT
CTGTTCTTCG TTCGTCTGCA CGGTCCCGGG ACGTTTTACC TTCAGTCCCT CCCCGTGCAA
AAGCAACTCG ACAGCGGCGT TCGCCTCGGC GGTCGCAAGC TCAAGGTCAA GACGCAGTAA
 
Protein sequence
MPHDVTVVGT DTQIAQIKLK PGEEVAASPG AMCYMSSNVM SLTSLGPGGL PRAIMRALAG 
EPFFINTFRN LGSVEGYIAV GGLEPSDKIA VIELKDDTKH DILCARDSFM CSKGNIRITA
AAALRTTEND FASFADMLNI FNGEWLIGNG TVCINGKGTV VRRTLKKDEE MVVDARAVMA
LERSVGYDLE IQSSPLAAVF GGAGLFFVRL HGPGTFYLQS LPVQKQLDSG VRLGGRKLKV
KTQ