Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_10064 |
Symbol | |
ID | 5004765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009366 |
Strand | - |
Start bp | 275102 |
End bp | 276784 |
Gene Length | 1683 bp |
Protein Length | 561 aa |
Translation table | |
GC content | 54% |
IMG OID | 640420186 |
Product | predicted protein |
Protein accession | XP_001420806 |
Protein GI | 145352970 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [COG5274] Cytochrome b involved in lipid metabolism |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.14351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTCGTCG TCGGCGGCGG TTTAGCGGGC TTGACGGCTT CACTCACCGT GCTCGATCGT GGCGGTAGGG TGACGTTGGT AGAGAAAGAG GCATATGTTG GTGGTAATTC TCAGTGGGCG TCTTCGGGGA TCAACGGAGT GATCAAGACT TCGTTTGAAG ATAATCCCGA CAGCGTCGAA GCGTATTCAG ACGACTGCGA AAAATCCTCC TACGGAAACG GCAACGGTCG CGAAAATCTC GATCCCGAAA CCGTCGAACA TATCCCGACG CTCACTAGCC AGGCTGGTGC CACGATTGAA TGGCTTCGTC GACGCGTTGG CGCCGATTTA AGCCTACTTT CGAGGCTTGG AGGGCACAGC TACGCTCGTA CGTACAGACC GAACGAAGGT ATGGCGGGAT CGTCTCTCGT TTTCGCACTC AAAGGGAAAT GCGAAGACTA CATTCAATCT GGGCGATTTA AAGTGGTGAA AAAGGCTAGG GTGAGTGAAA TAATCACTGC TGAAGATGGC GCGATCAATG CCGTGCGTTG GACGCCATCC GATGGTTCGA ATGGTAGTAA TGTAGGCGGC GAAGTCAGAG CACGCCACGT GCTGCTCGCC ACCGGGGGAT ACTCGAATGA CAAGCAAGGA GAAGACGCAT TACTGAGCAA GTACGCGCCT CAGCTCACAA AGTTCGCCAC GACAAACACG AAAGGCACGA CCGGTGATGG ACACAAGCTC GCTTTTGGAT TAGGCGCTGG TGCTGTTGAC ATGCAACGCG TTCAAGTACA TCCCACGGGC TTCATCAATC CTGAAGACGA GGGCGCCGAC ACGAAAACGC TTGCCGCAGA ATTACTCCGA GGTGCGGGTG GTATTCTATT GAATCGTTCG GGTAAACGAT TTGCCAACGA GCTTGGCACG CGTGATTACG TCAGCGCTCG CATGCAAGAA GAAGACGCAG AAAAGCTCGA CTTCGTGTTA CTGCTTGATG AAAAAGGCGC GAGCGAAGCG AACAAGCATG TGCCGCTTTA CGTGAAGAAG AACCTGATGA CCAAGTTCGA CACACTCGCG GATTTGACGA AGTGGATGTC CGTCCGTGGA AACACGACGG AGTCTCAGCT TCGTGCGACG TTGGAGCAGT ACAACGACCA AGCCAATGCG GGTCTCGATG AATTCAACAA GACATACTTT GCTAACGCGC CTTTCAAAGT TTCTGGGCCG TTTTACGCCG GGCGAGTCAC GCCAGTGGTA CATTACACCA TGGGTGGTGT CAAGGTTGAT AGCTATGGAC GAGTCGTGCG AGCTGATGGA ACGCCCGTCG CTGGATTATT TGCCGCTGGG GAAATCATCG GTGGTGTGCA CGGCAAGAAT CGTCTAGGTG GAAATGCGCT CACTGAGTGC GCGGTGTTCG GGCGGCTCGT CGGCACGAAC GTGAACATTG TCTCAAACAC GGATGCGCCA TCTGCCGCGA CGGAGGTACC GAAACTGAAG ATACCGAAAC GAGATCGCAT TATCACGCAT GAGGAACTCG CTAAACACGC CTCCGCGGAT GACTGCTGGG TGGCTTTGTA CGGCCGTGTT TACGACTTTA CCGATTTCTT GGATGACCAT CCCGCCGGCG CCGACGCAAT TTTGCGATAC GGCGGAGGCG ACGGTACGAA AATCTTCGAA GCCGTGCATT CGCGTAACAT GCTGAATGAC TTC
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Protein sequence | LVVVGGGLAG LTASLTVLDR GGRVTLVEKE AYVGGNSQWA SSGINGVIKT SFEDNPDSVE AYSDDCEKSS YGNGNGRENL DPETVEHIPT LTSQAGATIE WLRRRVGADL SLLSRLGGHS YARTYRPNEG MAGSSLVFAL KGKCEDYIQS GRFKVVKKAR VSEIITAEDG AINAVRWTPS DGSNGSNVGG EVRARHVLLA TGGYSNDKQG EDALLSKYAP QLTKFATTNT KGTTGDGHKL AFGLGAGAVD MQRVQVHPTG FINPEDEGAD TKTLAAELLR GAGGILLNRS GKRFANELGT RDYVSARMQE EDAEKLDFVL LLDEKGASEA NKHVPLYVKK NLMTKFDTLA DLTKWMSVRG NTTESQLRAT LEQYNDQANA GLDEFNKTYF ANAPFKVSGP FYAGRVTPVV HYTMGGVKVD SYGRVVRADG TPVAGLFAAG EIIGGVHGKN RLGGNALTEC AVFGRLVGTN VNIVSNTDAP SAATEVPKLK IPKRDRIITH EELAKHASAD DCWVALYGRV YDFTDFLDDH PAGADAILRY GGGDGTKIFE AVHSRNMLND F
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