Gene OSTLU_44192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_44192 
Symbol 
ID5004600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp319343 
End bp320146 
Gene Length804 bp 
Protein Length267 aa 
Translation table 
GC content69% 
IMG OID640420021 
Productpredicted protein 
Protein accessionXP_001420307 
Protein GI145351919 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5082] Arginine methyltransferase-interacting protein, contains RING Zn-finger 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0620048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00852794 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGACGATG ACGCGCCCGG TGGGCCGCAG GGCGCGCGCT CGTACGCCCC GTACGCGGGC 
GCGCAGGCGA ACGATGCGTG TCGGAATTGC GGCCAGCTCG GACACTACGC GAGAAACTGC
GCGCAGAACG CCGGACTGAA CGGCGGCCGC GGCGCCGATC GATGCAATCG ATGCGGACAG
ATCGGACACT GGGCGAGCGA GTGCTCGCTG CCGTACTCGG GCGGCGCGGG CGCGGGAGGG
TTCCGAGGGG CGGTCGGCGG CGGCGGCGCG CGGCCGGGCG ATCGGTGCTC TAGGTGCGGA
GGACTCGGAC ACTACGCGCG CGCGTGCCCG TCGCCGGCCA TGGCGGCGTT CGCGGGAGGT
GCGGGAGGCG CGCCGAAGAC GTGCCATAAC TGTGGACGCG TGGGACACAT CGCGCGGGAC
TGCCGACAAG GCGGCGGCGC GCGAGGGTAC GATAACGCCA GAGCGCCGAA GCAACGCAAG
GGTGCGGGTC CGGACGATGT GTGTAATCGC TGCGGCGAAA AGGGACACTG GGCGAGCTCG
TGCTCGCAAC CGGACACGCG AACGGAGGCC GAGCGCACGA GACAAGCCAA GCCGGACGAT
AAGTGCCACC GATGCGGCGA GCTCGGGCAC TTCGCCAAGG ATTGCTCGTT GCCCCCGGAC
AACACGTGCA GAATTTGCAA GCAAGAGGGA CACTTCGCCA GAGAGTGCCC GAACAAGGAC
ACCGCGGCGG CAGCGAACAT GGATGCGGAC CTTGATAACT ACATGAAGGA GGGCGCGGAG
AAGAAGGAAA GCGGCGAGGC GTAA
 
Protein sequence
MDDDAPGGPQ GARSYAPYAG AQANDACRNC GQLGHYARNC AQNAGLNGGR GADRCNRCGQ 
IGHWASECSL PYSGGAGAGG FRGAVGGGGA RPGDRCSRCG GLGHYARACP SPAMAAFAGG
AGGAPKTCHN CGRVGHIARD CRQGGGARGY DNARAPKQRK GAGPDDVCNR CGEKGHWASS
CSQPDTRTEA ERTRQAKPDD KCHRCGELGH FAKDCSLPPD NTCRICKQEG HFARECPNKD
TAAAANMDAD LDNYMKEGAE KKESGEA