Gene OSTLU_17346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17346 
Symbol 
ID5004560 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp347198 
End bp348442 
Gene Length1245 bp 
Protein Length358 aa 
Translation table 
GC content57% 
IMG OID640419981 
Productpredicted protein 
Protein accessionXP_001420481 
Protein GI145352283 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.908819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.780808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGA CGGCGGCGCG ACGAAAGAAG AGCGCCGCGG CGGCGGCGGA GGAGACGATG 
TGCGTGCGCG GAGGAATGTC TCGCTCGCGC GCGACGATTC GCGGAGACGG AGAGCGCGGA
TGAGGGGAGA AACGACGTTT ATGAGGTTCC GAGACTCCGA GAGACGAATC GACGCGATCG
AATCGGCGCG CGCGACTGAC GAAGACGAAC GACGCTCGAT TGCGTAGGGT TGACGTGGAA
GAAGACGCCG GGGTGACGTT TGCGGAGGAA CAGTCGAACA TCGTGTCCAT CGATGCGCTG
CAGCAGAGCG GGGTGTCGGC GACGGATATA AAAAAGTTGA GAGACGCGGG ATTCGTCACG
GTGAGACAGT TGTTGATGTT TCCGCGAAAG GCGATCATCG CGGTCAAAGG CTTCTCTGAC
GCTAAAGCGG ATAAGGTTTT GGAAGGTGCG GTCAAACTGT TACCGGAGAG CGAAGCTGGG
GGATTTGTCA CGGCGGCGGA GGATGCGGAG CGACGCAAGG ATGTGGTGCA TATTACATCT
GGAGCCGCCG CGGTGGACGC GATCTTGGGC GGCGGATTTG AAAGTCGAGC GATCACGGAG
ATTTACGGCG AGTGGCGATG CGGCAAGACC CAGCTATGTC ACACTATTGC CGTTACGACG
CAAATGCCGG TGGAAATGGG CGGTGGATGC GCCAAGGTGG CGTGGATCGA TACCGAAAAC
ACCTTCCGCG GAGACCGCCT CGTTCAAATC GCGAACCGCT TTGGACTGGA CGCTGACGCC
GTTTTATCGA ACGTCATGGT CGCTCGCGTG GATACCGTCG ATCAAATGAT GCATGCTCTC
ATCGCTATTG GCGCGAAAAT GGCTGAAGAA CCTTTCAAGT TACTCGTCGT CGACAGCATC
ATGGCGATTT TTCGAGTGGA TTACGTCGCG AGAGGAGAGT TGAGCGAACG ACAGCAGACA
CTCAATCAGT TCCTCTCTCG CTTGCGAAAA ATTGCCGAAG AATTCAACGT CGCCGTCGTG
CTCACTAATC AAGTCCAATC TGACCCGGGG GGCATGGCTT TCGCGGGAGT TGAACCAAAG
AAGGCGATCG GGGGGCACGT TTTGGCCCAT GCGTCTACGA TTCGTCTGAT GGTAAGAAAG
GGCAGAGCCG AGGCGCGCGT GCTCAAAGTG CTTCAAGGTC CGACTCTGAA AGAAGACGAA
GCTGAATTCC AGATCACGGA AGGCGGAGTG ACGGGGATGG AATGA
 
Protein sequence
MSTTAARRKK SAAAAAEETM VDVEEDAGVT FAEEQSNIVS IDALQQSGVS ATDIKKLRDA 
GFVTVRQLLM FPRKAIIAVK GFSDAKADKV LEGAVKLLPE SEAGGFVTAA EDAERRKDVV
HITSGAAAVD AILGGGFESR AITEIYGEWR CGKTQLCHTI AVTTQMPVEM GGGCAKVAWI
DTENTFRGDR LVQIANRFGL DADAVLSNVM VARVDTVDQM MHALIAIGAK MAEEPFKLLV
VDSIMAIFRV DYVARGELSE RQQTLNQFLS RLRKIAEEFN VAVVLTNQVQ SDPGGMAFAG
VEPKKAIGGH VLAHASTIRL MVRKGRAEAR VLKVLQGPTL KEDEAEFQIT EGGVTGME