| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_10480 |
|---|
| Symbol | |
|---|
| ID | 5004518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | - |
|---|
| Start bp | 431367 |
|---|
| End bp | 431900 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | 640419939 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420507 |
|---|
| Protein GI | 145352339 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR01621] pseudouridine synthase Rlu family protein, TIGR01621 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00789821 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | CGCGTGCTGT ACGAAAACGA CGCGGTGGTG ATCGTGAATA AACCGCCGGG GGTGTCGTTT
CACAGCGAAT TCGAACCTGG GGCGCTGGCG CGGCTGCGCG CGAGTCGCGA CGCGCGCGAA
GAGCGCCTTC GCGCCGTGCA CAGGTTGGAC AAGGGCACGA GCGGGACGCT AGTGTTCGCG
AAGACGGCGG ACGCGGCGAA GAAACTGAGC GATGGGTTCG CGACGCGGGC GATCGTCAAG
TATTACGTCG GGATTTCGGG GAAAAAGCCG AAGAAGAAGA TGGGGACGGT GACGGGGGAC
ATGGCGCGAG CGCGGCGAAA GGCGTACAAA CTGACGAACA CGAAAGATAA TCCGGCGGTG
ACGAAATTCG TGAGCTTCGG AGCGAAAGGG CGACGAATGT TCATATTTCG ACCGCTGACT
GGGAAGACGC ATCAGTTGCG AGTGTGCGCG AAATCGCTCG GCGCGCCGCT GTTGGGCGAC
GACGTGTATT CGGGGGCCGT CGCGGAACGA TGCTACTTGC ACGCGTGCGC GATA
|
|---|
| Protein sequence | RVLYENDAVV IVNKPPGVSF HSEFEPGALA RLRASRDARE ERLRAVHRLD KGTSGTLVFA
KTADAAKKLS DGFATRAIVK YYVGISGKKP KKKMGTVTGD MARARRKAYK LTNTKDNPAV
TKFVSFGAKG RRMFIFRPLT GKTHQLRVCA KSLGAPLLGD DVYSGAVAER CYLHACAI
|
|---|
| |