| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_26150 |
|---|
| Symbol | |
|---|
| ID | 5004151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009364 |
|---|
| Strand | - |
|---|
| Start bp | 311944 |
|---|
| End bp | 313301 |
|---|
| Gene Length | 1358 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640419572 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420142 |
|---|
| Protein GI | 145351563 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.22468 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCA AACCGGGCAA AGATTTCAAA GTTCCACCGC CGAGCGTGAC GAGCGACGCG
GTCGGCACGG GCGGACGGTC GTCGTTCAGG TGCGCGCGAG CGATCGGTGA CGCGACGCGA
CGCGCGATCG CGCGCGACGA GCGAACGCGG GTGGACTGGA CGCGAGCGAG CGCGGGGCGA
TAGGTTTGAG GACGCGAGTA AAGCGGCGAC GACGCGACGC GGCGACGCAA AGGCGCGCCG
GCGTGGAAAT CGCGTCGAGA GTCGGTGCAC GACGCTCGTG CGAGTCGTCG CCGGTGGACG
CCGACGAGCA GAGAGACTGA CGAATGGGAT TTTTGATGAC GAACAGCGGG ATCACGTGCA
CGGTTTTCGG CTCGACGGGT TTTTTGGGAC GATACGTCGT CCATCACGTC GCCAAGAGCG
GGTCGCGCAT GATTCTACCC ACGCGATGCT CGGAGAATGA TCGTCAACAT CTCAAAGTGA
TGGGAGACCT CGGGCAGATT GTGCAGTTGG ATTACGGGAT CAGAGACGAG GAGACGATTC
GATACGCCGT AGAGCGGAGC AACGTCGTCA TCAACATGGT GGGTCGAGAG TGGGAGACGC
GTAACTTTTC GTTCGAAGAC GTCAACGTGA CGTTTCCAAA GAAATTGGCG GAGATTTGCG
CCGACGTGGG CGTGCGTAGA CTGGTTCACG TGAGCGCTTT GGGGGCCGAG GAAGACCACC
CGAGTGCGTA TTACAGATCA AAAGCCGCCG GCGAGGCGGC GGTGCGGGAG GCGTTCCCTT
CAGCTACGAT AGTGCGGCCG GCCAAAATAG TGGGCGTCGA AGATAGATTC TTGAACATTT
TCGGCGAGCA TTCGCGCAAG TATCCAGCGG TGCCTATCAT CGATGGCGGC GACACCAAGC
ACCAACCCGT GTTCGTGGAT GACGTCGCGG TGGCGATTCG TCAAATCGTC CACGACGAGT
TGACGAGCGG GCGAACGTAC GAGCTCGCGG GGAATAAGGT GTATACTTTT GACGAACTTG
CGAAGATGGT TCTTAAAACC ATTCGCACGC GCAAGTCGAC GGCGTACATC CCGAGTTTCA
TCATGAAGGC GCTCTCGTGT CCGCACGAGT GGCTTTTGCG ACGCGTACCG TTCCCCATGC
CCACCCCGTT GGGCTTGACG CGATCGTACA TCGACGCTCA AAGCCGAGAT TACGTCAAGC
GGGCCGACAG CCTCGGTTTT TCCGATCTCG GCATTGAGCC GAACAACATC GAAAACGGCT
ACGTGTTGGA CTACTTGCGA AGCTTCCGCG CAGGGGGCTA CCAAGTCGGC GACGCCCCGT
GGGAACACGA AGAGCGCGAC GCCAAACTAT CCGCGTGA
|
|---|
| Protein sequence | MSIKPGKDFK VPPPSVTSDA VGTGGRSSFS GITCTVFGST GFLGRYVVHH VAKSGSRMIL
PTRCSENDRQ HLKVMGDLGQ IVQLDYGIRD EETIRYAVER SNVVINMVGR EWETRNFSFE
DVNVTFPKKL AEICADVGVR RLVHVSALGA EEDHPSAYYR SKAAGEAAVR EAFPSATIVR
PAKIVGVEDR FLNIFGEHSR KYPAVPIIDG GDTKHQPVFV DDVAVAIRQI VHDELTSGRT
YELAGNKVYT FDELAKMVLK TIRTRKSTAY IPSFIMKALS CPHEWLLRRV PFPMPTPLGL
TRSYIDAQSR DYVKRADSLG FSDLGIEPNN IENGYVLDYL RSFRAGGYQV GDAPWEHEER
DAKLSA
|
|---|
| |