Gene OSTLU_24940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_24940 
SymbolCGE1 
ID5003474 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp393674 
End bp394774 
Gene Length1101 bp 
Protein Length274 aa 
Translation table 
GC content58% 
IMG OID640418895 
Productchloroplast GrpE-like protein 
Protein accessionXP_001419369 
Protein GI145349909 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.167019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.369132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GCGAACCGTC GAGCAGCCGA CGCGCGGGCG CACCGAGGAT GTCCGCGATC ACGATCTCGA 
TCGCGTCGGC GCCCGCGCGC GCGCGCGCCC GCGCGACGAC GACGACGACG ACGATGCGCG
CGAAGATGAA TCTTCGAGCG TGTTCGACAC CTTCGGGGGC GACGCGCGAG GCGCGAGCGA
TGAAGATCAT CGCGCGCGCG GGGGAAGAAG AGGTGCGATA GAACGACGCG TGGCGAGACT
CGAGGGCGAC GCGCGAGGCC GACGGCGCGC GAGGGATCGA GGATTAGACG GGCGAGCGAC
GAGGGAGCGG GGCGACGAGG GTATCGGTCG ACGAGGACGA ACGAACGACT GACGAAACAA
CGCGTGTTCT CGCACCGCGC AGGGTGAAAC TGTTGAGACT GAAGAAGAAG TGCCCGAAGT
TGAAGTCGTC GAGGACGACG AAGAAGTCGC AGGAGGTGCG GAAGAAGAGG AGACCGCGTT
GAGCGCGCTC GTCGGTCGAC TCGAGGTCGT CGTCGGCGAT AACGCCGACG CAGCGGAGCT
TGTGGCCTCC CTCAAGGGAG AAATCGGTGA TGCAAACGCA AAGATGGTCG GTATGGAAGA
CCAAGTGGCC GCGATGAAGG ATCAATACTT GCGTTTGAAC GCAGACTTCG ACAACTTCCG
CAAGCGAACG CTCAAGGAAA AGGAGAACCT CGCGAGCAGC GCCAAGGGGG ACTTTGTCAA
GGCTCTCTTG CCCGTGCTCG ATAACTTTGA CCTCGCAGAG AAGAATATCA AGGGTTCGAC
CGAAGGTGAG GAGAAGATAT TGACGGGATA TCAAAACATG CACAAGCAGT TGATGGAAAT
TCTTTCATCG CAAGGCCTCC AAGTCGTCGC GGGCGTCGGT GAACCGTTCG ACCCGAACGA
CCATGAGGCT ATCATGCGGG AAGAGAACGA CGAGATGGAT GAAGATACCA TCATTGAAGA
ATTCAGAAAG GGCTATAAGA TCGGTAGTAG CCTCATCCGT GCTTCGATGG TGAAGGTTTC
GACCAAGCCG TAAAAGCTCA CCGACGCCCG TCGCGACGCT TTTATATATA CTAGGACTCA
TTTCAATTCA TTCATCCATT A
 
Protein sequence
MSAITISIAS APARARARAT TTTTTMRAKM NLRACSTPSG ATREARAMKI IARAGEEEGE 
TVETEEEVPE VEVVEDDEEV AGGAEEEETA LSALVGRLEV VVGDNADAAE LVASLKGEIG
DANAKMVGME DQVAAMKDQY LRLNADFDNF RKRTLKEKEN LASSAKGDFV KALLPVLDNF
DLAEKNIKGS TEGEEKILTG YQNMHKQLME ILSSQGLQVV AGVGEPFDPN DHEAIMREEN
DEMDEDTIIE EFRKGYKIGS SLIRASMVKV STKP