Gene OSTLU_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_1114 
Symbol 
ID5003334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp90785 
End bp92218 
Gene Length1434 bp 
Protein Length478 aa 
Translation table 
GC content63% 
IMG OID640418755 
Productpredicted protein 
Protein accessionXP_001419069 
Protein GI145349289 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0466739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.893767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GACAGCCTGC GCGAGGTCGA TCACGCGCGC GAGGAGTACG AAAAGTTTGA GCGCGTGACG 
TACGTCGCGC CGAAGGAGCT CGCGGACGTG GACGTCGGCG CGGCGCGGGC GGCGGCGGAC
GCGCGCGCGA GCGGCGGCGC GGAGGACGTC GCGCCGATCT CGCGGTTCGG TCAAGGCGGC
GCGTTGGACG TCGATTGCCT GCGGGCGCTG CGGCGGATGG GATACGAATC GCCGACCGCG
GTTCAGGCGC AGTGCTTGCC GGTGATCTGG AGCGGGCACG ATGCGTTGGT GATGGCGAAG
ACGGGGTCGG GGAAGACGCT GGCGTTTTTG CTGCCGGCGT ACGCGCAAAT TTCCAGGCAA
AGGCCGTTGA CGAAGCGCGA GGGCCCGATC GCGCTCGTGC TCGCGCCCAC GCGCGAACTC
GCGTCGCAGA TCGCGAACGA GGCGCACAAG TTTACGAAAT TTGGCGTATC GGGGGCGCGA
TGTTGCGCAA TCTTCGGCGG CGTCTCCAAG CGCGACCAAT TCAAAAAGCT TCGCGCGGGA
GCGGAGATCG TCGTCGCGAC GCCCGGGCGT TTGGTGGACG TGCTGTGCAT GAAGAATTCG
ACAAATTTAC GTCGCGTCAC GTACTTGGCG CTGGACGAAG CCGACCGAAT GCTTGACATG
GGTTTCGAAA AAATCGTACG CTCGATTTGT CAGGCGGTTC GTCCCGACAG GCAGTGCGTG
ATGTTTAGCG CCACGATGCC CGCGGCCATG CAGCGATTGG CTCGCGACGT TCTCGCGCGA
GACGCTGTCA CTGTCTCCAT CGGTAACGTC GGAGGCGCGA ATGAGGACGT GCGACAAGTC
GTGTACGTCT TCGAAGACGA CGCTCGCCGC GCGGCTTGGT TGTTTGAAAA TCTCGGCGAC
GCCGTCGACG AAGGACAAGC CATCGTCTTC GTCAATCACA AGTCGTCCGT GGAAGAGCTC
GTGAACGAGC TCGCGACGCG CGGAATAAAA GCCGTCGCCT TGCACGGCGA CTTGGATCAA
GCGCAAAGAC AATTCGCGAT GAAGGCTTTT AAGAGTGAGC ACGCGCACGT GCTCGTGGCG
ACGGATGTCG CCGCTCGCGG ACTCGACGTT GAGGCGATTA AAACCGTCGT AAACTTCCAC
CCCGCGCGCG ATATGTCGAC GCACGTGCAT AGAATCGGTC GCACCGGTCG CGCAGGTGCG
CTCGATGGCC GTGCGTACAC CTTGTTCACC GCGCGTGATT CTGCAAAGTT CGCGCAGCAG
TTGGAACAAA ATTTGGAAGC CGCGGGCCAA CCGGTGCCGC TCGATTTGAA GGCGCTCGCG
CGCGGCACGT ACAACAAACG CCCTAGAAGT GATCACGGCG GCGACGCACC TCGGCACGGC
AAGGTCGGCG GTAGGGGACT TGGTTTCACA TCGCACCATC GGCCGAGCGC AGGC
 
Protein sequence
DSLREVDHAR EEYEKFERVT YVAPKELADV DVGAARAAAD ARASGGAEDV APISRFGQGG 
ALDVDCLRAL RRMGYESPTA VQAQCLPVIW SGHDALVMAK TGSGKTLAFL LPAYAQISRQ
RPLTKREGPI ALVLAPTREL ASQIANEAHK FTKFGVSGAR CCAIFGGVSK RDQFKKLRAG
AEIVVATPGR LVDVLCMKNS TNLRRVTYLA LDEADRMLDM GFEKIVRSIC QAVRPDRQCV
MFSATMPAAM QRLARDVLAR DAVTVSIGNV GGANEDVRQV VYVFEDDARR AAWLFENLGD
AVDEGQAIVF VNHKSSVEEL VNELATRGIK AVALHGDLDQ AQRQFAMKAF KSEHAHVLVA
TDVAARGLDV EAIKTVVNFH PARDMSTHVH RIGRTGRAGA LDGRAYTLFT ARDSAKFAQQ
LEQNLEAAGQ PVPLDLKALA RGTYNKRPRS DHGGDAPRHG KVGGRGLGFT SHHRPSAG