Gene OSTLU_8500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_8500 
Symbol 
ID5002875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009361 
Strand
Start bp291800 
End bp292258 
Gene Length459 bp 
Protein Length153 aa 
Translation table 
GC content69% 
IMG OID640418296 
Productpredicted protein 
Protein accessionXP_001418664 
Protein GI145348455 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5082] Arginine methyltransferase-interacting protein, contains RING Zn-finger 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.768552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000480268 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GGCGGACGCG GCGCGCGCGG CGCGCGCGGC GGACGCGGCG GACGCGGACG CGGCGACGCG 
CGCGCGCCGT CGTCGAACGG GGGCATCTGG AGGAGCAAAG TCACGTGCTT CGGGTGTCGA
GGCGTCGGAC ACACGCTGCG GGACTGCCGC GTGGCCAAGG GCGGGAGCGC GACGATGCGG
CGAGGGGAGA AATCGTGCTA TAACTGCGGC GCGAGCGATC ACGCGGCGCG AGACTGCGCG
GCGGCGTGGA CGAATTACGC GCACGCGAAG TGCTTCGTGT GCGGCGAGAC GGGACACCTG
AGCAAGAGCT GCCCGAGGAA CGAGCGCGGG GTGTACGTGA ACGGAGGTGA GTGTAAGATA
TGCAAGGCGA AGGATCACTT GGTGAAGGAT TGCCCGCACA AGGGAGACAC GTGCATTCGG
TGCGGGGAGC GGGGACACTT CGCGGCGGGA TGCTCGAAA
 
Protein sequence
GGRGARGARG GRGGRGRGDA RAPSSNGGIW RSKVTCFGCR GVGHTLRDCR VAKGGSATMR 
RGEKSCYNCG ASDHAARDCA AAWTNYAHAK CFVCGETGHL SKSCPRNERG VYVNGGECKI
CKAKDHLVKD CPHKGDTCIR CGERGHFAAG CSK