| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_46103 |
|---|
| Symbol | |
|---|
| ID | 5002751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009361 |
|---|
| Strand | + |
|---|
| Start bp | 46726 |
|---|
| End bp | 48713 |
|---|
| Gene Length | 1988 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640418172 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418593 |
|---|
| Protein GI | 145348306 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0441] Threonyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.036188 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ACGGGGGCGG GCGCGAGCGC GGCGGCGAGC GATAAGGCGA ACGCGACGGC GAGCGACGCG
GAGCCGGTGA AACTGCTGAC GAGCGATGAG AGCGAGAATT TGTTGAAAAT ACGACACACG
GTGCGTTGGA AATGCGAGGC GTGGGGAGAC TTGCGTCGGT GGTGGATCGG ACGACGACGC
GCGAGGGGCG AGCGGAGGGG GTTTGTGCGC GACCTGAACC ACGCAGGGAC GAAAGGAGAC
TGACGATGGG TTCGCTGATT TTACGCTTCG CAGAGCGCGC ACGTGATGGC GATGGCGGTG
CAAAAGGTGT TTCCGAGCGC GCAGTGCACG ATCGGGCCTT GGATCGACCG GGGATTTTAT
TACGACTTTT ACTACCCAGA GGGTTTCACC GATCAAGACA TGAAGAAGAT TCAAAAGGAA
ATGTATAAGA TTATTCGCAA GGATTACCCG CTTCGCAGGG AGGAAGTGTC GCGAGAAGAA
GCCGAACGCC GAATCCGGGA GATTAACGAG CCGTACAAGC TCGAAATCTT AGAAGCCATC
AAGACGGAGC CGATTACGAT TTATCACATC GGCGACGAGT GGTGGGATTT GTGCGCGGGA
CCTCACGTGG AGTCCACGGG CAAGCTTGAT CAGAAAGCGT TCGCGCTCGA AAGTTTGGCT
GGGGCGTACT GGCGTGGTGA CGAAACGAAG CCGATGTTGC AGCGCATTTA CGGCACGGCG
TGGGAGAATG AAGCACAGCT TCAGGCGTAC AACGATTTCA AGGCGGAGGC GAAGCGTCGC
GATCACCGAA CGATCGGTAA GGATTTGGGT TTGTTCTCCC TTCAACAAGA TAACGCTGGC
GGCGGCTTGG TGTTTTGGCA TCCGAAAGGC GCGCACATGC GACACATGAT CGAGACGTAC
TGGAAGGATC TCCATCTGGC GCGCGGGTAC GAGCTCTTGT ACTCACCGCA CGTCGCCAGG
CAAGAGTTGT GGAAAACCTC TGGTCACAGC GATTTTTATT CCGAGAACAT GTACCAGCCC
ATCAAGGTTG AAGATGAAAT GTATCAGCTC AAACCGATGA ACTGCCCGTT CCACATCGTC
GTTTACCAAG ACGGATACTA CTCGTACAAG GATTTACCCA TTCGTTGGGC TGAGCTTGGC
ACGGTGTATA GATATGAACG TAGCGGCACC ATGCACGGCT TGTTCCGAGT GAGAGGTTTC
ACGCAGGATG ACGCGCATAT ATTCTGCCTC CCGGATCAAA TCACAGACGA GATCAAGAGC
GTTCTCGATT TGACTGAAGA AATTCTGAGC ACGTTTGGTT TTAAGGAGTT TGAAGTCAAC
CTATCCACCA GGCCGGAAAA GTCTGTCGGC GACGACAAGA TTTGGGACAC CGCGGAAGGT
GCGCTTAAGG ACGCATTGCA AATGAAGGGA TGGGATTACA TCGTCGACGA CGGCGGTGGA
GCGTTCTACG GGCCGAAGAT TGACATTAAG ATTTTGGACG CAATCGGGCG TAAGTGGCAA
TGCTCCACGG TGCAGCTCGA CTTCAACCTG CCGGAGCGAT TCGACCTATC CTACGTCGAT
CGCGAGAACG CAAAGCAGCG ACCAATCATG ATTCACCGCG CCATTTTCGG TTCCCTTGAG
AGATTCTTCG GTATTCTCAC CGAGAACTAC GCCGGGGAGT TCCCGTTGTG GCTCGCCCCG
ATTCAAGTGC GCTTGCTTCC TGTGACGGAC GAAGTCAGCG ATTATACCGA AGGCGTCGCG
AAAAAGCTCC GCGATGCGGG CGTGCGCGTT GAAATTTGCA CCGGACAACG TCTCGCTAAG
CTCGTGCGCA CGGCTGAGAA GGCAAAGATC CCGGTCATGG CGGTCGTCGG TAGAGAAGAA
GCGGAGAACA ACACGTTGGC TGTGCGTACG TTCAAGGATG GCGACGTCGG TACATTGTCT
GTCGACGAAG TGTTGTCACG CGTCACCACC GCGAACGCGA CAAAGGGTCA AAGCTTCTAG
GAAGAGTC
|
|---|
| Protein sequence | MAMAVQKVFP SAQCTIGPWI DRGFYYDFYY PEGFTDQDMK KIQKEMYKII RKDYPLRREE
VSREEAERRI REINEPYKLE ILEAIKTEPI TIYHIGDEWW DLCAGPHVES TGKLDQKAFA
LESLAGAYWR GDETKPMLQR IYGTAWENEA QLQAYNDFKA EAKRRDHRTI GKDLGLFSLQ
QDNAGGGLVF WHPKGAHMRH MIETYWKDLH LARGYELLYS PHVARQELWK TSGHSDFYSE
NMYQPIKVED EMYQLKPMNC PFHIVVYQDG YYSYKDLPIR WAELGTVYRY ERSGTMHGLF
RVRGFTQDDA HIFCLPDQIT DEIKSVLDLT EEILSTFGFK EFEVNLSTRP EKSVGDDKIW
DTAEGALKDA LQMKGWDYIV DDGGGAFYGP KIDIKILDAI GRKWQCSTVQ LDFNLPERFD
LSYVDRENAK QRPIMIHRAI FGSLERFFGI LTENYAGEFP LWLAPIQVRL LPVTDEVSDY
TEGVAKKLRD AGVRVEICTG QRLAKLVRTA EKAKIPVMAV VGREEAENNT LAVRTFKDGD
VGTLSVDEVL SRVTTANATK GQSF
|
|---|
| |