| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_24843 |
|---|
| Symbol | CMS |
|---|
| ID | 5002890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009361 |
|---|
| Strand | + |
|---|
| Start bp | 586545 |
|---|
| End bp | 587416 |
|---|
| Gene Length | 872 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | |
|---|
| GC content | 64% |
|---|
| IMG OID | 640418311 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT) (ISPD) |
|---|
| Protein accession | XP_001418750 |
|---|
| Protein GI | 145348632 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.56499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0645065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CTCGCCGAGC GCGCGCGCGC ACGCCTCGCG ACCATGCTCT CGCGAAGAGC GACCGTGATC
GCGCCCGCGC GCGCGGCGCC CGAGAGCGCG CGACGCGTCG CGCGGACGCG CGCGCGGCGC
GGCGCGAACG TCCGAACGCG CGCGGCGAGC GAGGTCACGC AGGACGTCGC CGACGGCGCC
GTGTCCTTCG TCCTGCTCGC GGGCGGCGTG GGCAAGCGCA TGGGAGCGGA CATGCCGAAG
CAGTACCTGC CGCTCATGGG CACGCCGATC GCGCTGTGGT CGCTTCGGAA GTTTGCGAAG
ATGGCTGAGG TCGGGGAGAT CGTCGTCGTG TGCGACCCGA GCTACGACGA CGTGTTTCAG
AGCGAAGCGA TCGATAAGCC GCTGGTGTTC GCGAGACCGG GGAAAGAGCG ACAAGATAGT
GTGTATAATG GCATGCAAGC GGCGCGGGCG GGGGCGGAGT TGTTGGCGAT TCACGATAGC
GCGCGACCGC TGTGCGCGGC GACGGATGCG AGGCGGTGCT TCAACGACGC GAAAAAGTAC
GGTGCGGCGG TTTTGGCGGT GCAGAGTAAG GCGACGATTA AGGAAGTGAA TAAGGATTTG
AGCATCGATA AGGGGCTCGA TCGCAGTCGG CTTTGGGAGA TGCAAACGCC GCAAGTGATG
CGACCCGAGT TGTTGCGAGC GGGATACGAT CTCGTGAATA GTAAGGGACT TGAGGTGACG
GACGATGTAT CCATCGTCGA AGCCTTAGGT GAGCGCGTGC AAGTGACGCC GGGGAGTTAT
TTCAACTTGA AGGTCACGAC GCCGGAGGAC ATGTTCATCG CGGAACGGCT GATGACGGAG
CAGGGCGACG CCGTCGCATA AATAATTCTA AT
|
|---|
| Protein sequence | MLSRRATVIA PARAAPESAR RVARTRARRG ANVRTRAASE VTQDVADGAV SFVLLAGGVG
KRMGADMPKQ YLPLMGTPIA LWSLRKFAKM AEVGEIVVVC DPSYDDVFQS EAIDKPLVFA
RPGKERQDSV YNGMQAARAG AELLAIHDSA RPLCAATDAR RCFNDAKKYG AAVLAVQSKA
TIKEVNKDLS IDKGLDRSRL WEMQTPQVMR PELLRAGYDL VNSKGLEVTD DVSIVEALGE
RVQVTPGSYF NLKVTTPEDM FIAERLMTEQ GDAVA
|
|---|
| |