Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_87451 |
Symbol | |
ID | 5002350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009360 |
Strand | + |
Start bp | 161941 |
End bp | 163524 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | |
GC content | 55% |
IMG OID | 640417771 |
Product | predicted protein |
Protein accession | XP_001418169 |
Protein GI | 145347429 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02342] T-complex protein 1, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.452422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00282742 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGGCGA CGATGGCGGG GGAGCGGTAC GTGGAGAATA AGCTGAAACA CGACGTGCGG GTGTCGAACA TGACGGCGGC GAAGAAGCTC GCGGACGCGA TCCGAACGTC GCTCGGGCCG AGAGGCATGG ACAAGATGAT GGTGAACGCG AAGAACGACG TGACGATATC GAACGATGGA GCGACGATAT TGAAAACGAT GGACGTGACG CATCCGGCGG CGAAGATGCT GGTCGAGCTG TCGAAATCGC AAGACATCGT GGCGGGGGAC GGGACGACGA GCGTGGCGGT TTTGTGCGGG GCGCTGTTGG ATAAATGTAT CGGATTGTTA GGACGAGGCG TGCATCCGAC GGTGATTTCG GACGCGATGT CGACGGCGTG TGAGAAGGCG TGCGAAATTT TGGAGGGAAT GAGCGATCCG GTGGATTTGA ATGATCGCGA AAGTTTGATT CAGGCGGCGA CGACGAGTCT GGGGTCAAAA GTCGTCGCGC AGTACTCGAG CTTGTTGAGC CCGATTGCGG TGGATTGCGT GCTCAGAGTG CTCGACCAAG AGCGGCCGAA CATGGTAGAT TTGCGAGACG TGAAGATCGT AAAAAAGGTC GGGGGCACGA TGGACGATAC CGAGTTGGTG GACGGCATCG TCTTCGACCA AAAGCCGAGC AAGGCGGCGG GCGGACCGAC GAGAGTGGAG GACGCGAAGA TTGGTTTGGT ACAGTTTTGC ATCTCCCCGC CGAAGACGGA CTTAGAGAAC AACGTCATCG TAAGTGATTA CACGCAGATG GATAAAATTT TACGCGAAGA GCGCAACCAC ATCATCGGTA TCATCAAGAA GATCAAGGCG AGCGGTTGCA ACGTTCTCTT GGTGCAAAAG TCAATCTTGC GCGACGCGGT GTCGGATTTG GCGCTCCATT ACTTGGCCAA GGCGAAGATT TTAGTCATTC GTGACATCGA GCGCGAAGAA ATTGAATTCA TCAGTAAGAC GCTTCACTGT CAACCGGTGG CGCACGTCGA TCACATGACG CCGGATAAGC TTGGTCACGC CGCACTCGTG AACGAGAAGC AGTGCGGAAA CGGCAAGGTT GTCCAAGTCA CCGGTGTCGA GAACATGGGT CGTACTGTTT CAGTCATAGT TCGCGGTGGT AATCAGCTCG TCGTCGAAGA AGCCGACAGA TCGCTTCACG ACGCTCTGTG CGTCATTCGC TGCTTGGTGC AAAAGCGATT TTTAATCGTC GGCGGCGGAG CGCCCGAGGT TGAAATGTCC CAAAAGCTCG GCTATTGGGC GCGCACGCTA AGCGGGATGG ATGCCGTCGC TGTGAAGGCG TTCGCTGAAG CTTTAGAGGT GGTTCCGTAC ACATTGGCTG AAAACGCTGG TTTGAACCCG ATTGAAATCG TCACCGAGTT GCGCAACGCT CACGTCGCCG GCAACGTGCA CCACGGCATC AACGTTCGCA AGGGAACGAT TTCCAACATG AAGGAGGAGA ATGTGCTCCA ACCTTTGTTA GTATCAACGA GTGCGCTTTC CTTGGCGACT GAGTGCGTTC GAATGATTCT CAAAATAGAT GACATCGTGC CAAGCATGAG GTGA
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Protein sequence | MTATMAGERY VENKLKHDVR VSNMTAAKKL ADAIRTSLGP RGMDKMMVNA KNDVTISNDG ATILKTMDVT HPAAKMLVEL SKSQDIVAGD GTTSVAVLCG ALLDKCIGLL GRGVHPTVIS DAMSTACEKA CEILEGMSDP VDLNDRESLI QAATTSLGSK VVAQYSSLLS PIAVDCVLRV LDQERPNMVD LRDVKIVKKV GGTMDDTELV DGIVFDQKPS KAAGGPTRVE DAKIGLVQFC ISPPKTDLEN NVIVSDYTQM DKILREERNH IIGIIKKIKA SGCNVLLVQK SILRDAVSDL ALHYLAKAKI LVIRDIEREE IEFISKTLHC QPVAHVDHMT PDKLGHAALV NEKQCGNGKV VQVTGVENMG RTVSVIVRGG NQLVVEEADR SLHDALCVIR CLVQKRFLIV GGGAPEVEMS QKLGYWARTL SGMDAVAVKA FAEALEVVPY TLAENAGLNP IEIVTELRNA HVAGNVHHGI NVRKGTISNM KEENVLQPLL VSTSALSLAT ECVRMILKID DIVPSMR
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