Gene OSTLU_87451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_87451 
Symbol 
ID5002350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009360 
Strand
Start bp161941 
End bp163524 
Gene Length1584 bp 
Protein Length527 aa 
Translation table 
GC content55% 
IMG OID640417771 
Productpredicted protein 
Protein accessionXP_001418169 
Protein GI145347429 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02342] T-complex protein 1, delta subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.452422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00282742 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGGCGA CGATGGCGGG GGAGCGGTAC GTGGAGAATA AGCTGAAACA CGACGTGCGG 
GTGTCGAACA TGACGGCGGC GAAGAAGCTC GCGGACGCGA TCCGAACGTC GCTCGGGCCG
AGAGGCATGG ACAAGATGAT GGTGAACGCG AAGAACGACG TGACGATATC GAACGATGGA
GCGACGATAT TGAAAACGAT GGACGTGACG CATCCGGCGG CGAAGATGCT GGTCGAGCTG
TCGAAATCGC AAGACATCGT GGCGGGGGAC GGGACGACGA GCGTGGCGGT TTTGTGCGGG
GCGCTGTTGG ATAAATGTAT CGGATTGTTA GGACGAGGCG TGCATCCGAC GGTGATTTCG
GACGCGATGT CGACGGCGTG TGAGAAGGCG TGCGAAATTT TGGAGGGAAT GAGCGATCCG
GTGGATTTGA ATGATCGCGA AAGTTTGATT CAGGCGGCGA CGACGAGTCT GGGGTCAAAA
GTCGTCGCGC AGTACTCGAG CTTGTTGAGC CCGATTGCGG TGGATTGCGT GCTCAGAGTG
CTCGACCAAG AGCGGCCGAA CATGGTAGAT TTGCGAGACG TGAAGATCGT AAAAAAGGTC
GGGGGCACGA TGGACGATAC CGAGTTGGTG GACGGCATCG TCTTCGACCA AAAGCCGAGC
AAGGCGGCGG GCGGACCGAC GAGAGTGGAG GACGCGAAGA TTGGTTTGGT ACAGTTTTGC
ATCTCCCCGC CGAAGACGGA CTTAGAGAAC AACGTCATCG TAAGTGATTA CACGCAGATG
GATAAAATTT TACGCGAAGA GCGCAACCAC ATCATCGGTA TCATCAAGAA GATCAAGGCG
AGCGGTTGCA ACGTTCTCTT GGTGCAAAAG TCAATCTTGC GCGACGCGGT GTCGGATTTG
GCGCTCCATT ACTTGGCCAA GGCGAAGATT TTAGTCATTC GTGACATCGA GCGCGAAGAA
ATTGAATTCA TCAGTAAGAC GCTTCACTGT CAACCGGTGG CGCACGTCGA TCACATGACG
CCGGATAAGC TTGGTCACGC CGCACTCGTG AACGAGAAGC AGTGCGGAAA CGGCAAGGTT
GTCCAAGTCA CCGGTGTCGA GAACATGGGT CGTACTGTTT CAGTCATAGT TCGCGGTGGT
AATCAGCTCG TCGTCGAAGA AGCCGACAGA TCGCTTCACG ACGCTCTGTG CGTCATTCGC
TGCTTGGTGC AAAAGCGATT TTTAATCGTC GGCGGCGGAG CGCCCGAGGT TGAAATGTCC
CAAAAGCTCG GCTATTGGGC GCGCACGCTA AGCGGGATGG ATGCCGTCGC TGTGAAGGCG
TTCGCTGAAG CTTTAGAGGT GGTTCCGTAC ACATTGGCTG AAAACGCTGG TTTGAACCCG
ATTGAAATCG TCACCGAGTT GCGCAACGCT CACGTCGCCG GCAACGTGCA CCACGGCATC
AACGTTCGCA AGGGAACGAT TTCCAACATG AAGGAGGAGA ATGTGCTCCA ACCTTTGTTA
GTATCAACGA GTGCGCTTTC CTTGGCGACT GAGTGCGTTC GAATGATTCT CAAAATAGAT
GACATCGTGC CAAGCATGAG GTGA
 
Protein sequence
MTATMAGERY VENKLKHDVR VSNMTAAKKL ADAIRTSLGP RGMDKMMVNA KNDVTISNDG 
ATILKTMDVT HPAAKMLVEL SKSQDIVAGD GTTSVAVLCG ALLDKCIGLL GRGVHPTVIS
DAMSTACEKA CEILEGMSDP VDLNDRESLI QAATTSLGSK VVAQYSSLLS PIAVDCVLRV
LDQERPNMVD LRDVKIVKKV GGTMDDTELV DGIVFDQKPS KAAGGPTRVE DAKIGLVQFC
ISPPKTDLEN NVIVSDYTQM DKILREERNH IIGIIKKIKA SGCNVLLVQK SILRDAVSDL
ALHYLAKAKI LVIRDIEREE IEFISKTLHC QPVAHVDHMT PDKLGHAALV NEKQCGNGKV
VQVTGVENMG RTVSVIVRGG NQLVVEEADR SLHDALCVIR CLVQKRFLIV GGGAPEVEMS
QKLGYWARTL SGMDAVAVKA FAEALEVVPY TLAENAGLNP IEIVTELRNA HVAGNVHHGI
NVRKGTISNM KEENVLQPLL VSTSALSLAT ECVRMILKID DIVPSMR