Gene OSTLU_41188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_41188 
Symbol 
ID5002402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009360 
Strand
Start bp348248 
End bp348748 
Gene Length501 bp 
Protein Length167 aa 
Translation table 
GC content60% 
IMG OID640417823 
Productpredicted protein 
Protein accessionXP_001418453 
Protein GI145348015 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.813084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGC TGCCGCGCGT CTTTTTCGAC GTCGCGATCG GTCGCGAACG CGTCGGGAGG 
ATCACGATTG AGCTCCGAAG CGACGTCGTG CCGAAAACCT GTGAGAATTT CCGACAGCTC
TGCGCGAACG AGCGCGGACA CAGGCTGTCG TACGCCGACA GCACGTTCCA CAGAGTGATA
CCGAACTTTA TGATTCAGGG CGGGGACTTC ACGAATCACG ACGGCACGGG AGGGGAATCG
GTGTACGGGC CGAAATTTCG GGATGAGAAT TTCACGCTCA AGCACGCGGG GGCGGGGACG
TTGTCCATGG CGAACGCCGG ACCGCACACG AATGGATCGC AGTTCTTTAT ATGCACCGGA
GACACGCCTT GGTTAGATGG GAAACACGTC GTGTTCGGAT CGGTGGTGGA TGGGATGGAC
GTCGTGCGAC GAGTGGAGGC GTGCGGGTCC AAGTCGGGCA AGACGAGGGA GACGGTGAAA
ATCGTCGAGT GCGGGGAGAT C
 
Protein sequence
MSPLPRVFFD VAIGRERVGR ITIELRSDVV PKTCENFRQL CANERGHRLS YADSTFHRVI 
PNFMIQGGDF TNHDGTGGES VYGPKFRDEN FTLKHAGAGT LSMANAGPHT NGSQFFICTG
DTPWLDGKHV VFGSVVDGMD VVRRVEACGS KSGKTRETVK IVECGEI