Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_917 |
Symbol | |
ID | 5001860 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009359 |
Strand | - |
Start bp | 434607 |
End bp | 436706 |
Gene Length | 2100 bp |
Protein Length | 657 aa |
Translation table | |
GC content | 56% |
IMG OID | 640417281 |
Product | predicted protein |
Protein accession | XP_001418014 |
Protein GI | 145347097 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.770015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACGACG ACCAGCGCGC CGCGGTGCTC GCGCCCGTGG GCGCGACGCG CGTGCTCGCG GGTCCGGGGT CCGGGAAGAC GCACGTGCTC ATCGGACGCG TCGCGCACCT GATTCACGAG CTGAAGACGC CGCCGAGGGA GATTTTGTGC ATCACGTTTA CGAATAAGGC GGCGCGCGAA CTGCGAGAAA GATTGAGGGA TAAGATTGGC GACGCCGCGG CGCGAGAGAT CACGGCAGGG ACGTTTCATT CCGTCGCGGC GAGGATGCTG CGACGACACG GCGATCGAAT TCCGGGCATA GGACGAACGG GAGAGTTTAC GATTTACGAC GCCGACGACA GCAAGCAAAT CGTGCAGGGC GTGTTGGTGA ACAAGTTTGG GGAGACGAAG AAGACGGCGC AGCCGGGACC GATGAGAAAC TGGATTAGTA CGTCGAAGTC GTGCGTGAAA CACTCGGTCG GGTTGAATGG GTCACACATG TTGCGGGCAC TTTTGGACGC GCACAAGCCC ATACCGCCGA TGTCGCACGA GCGCTTCGTG GAGTGTTACG ACGAGTACGA GCTCGGTTTG CGGCAAGCGA ACGCATTTGA CTTTGATGAC TTGCTTTCGG CGACAGTGGC GATGTTGGAG ATGTGCCCGG ACGTACGGTC GTATTATGAG CATCGATGGA GCCAGGTACT CGTTGACGAG TTTCAAGACA CTTCGACGAC GCAGTACGAG TTGATTAGAA AATTATCTCA GCCGCAAGGT TCAGTGTTCG TCGTGGGCGA CGCCGATCAG GCTATTTATG GTTGGCGCGG CGCCGAGGTC GCAAACATTC GCACGCAGTT CGATGAAGAC TTCAAGGATG TCCAGACGCA CATGCTGACG ACGAATTACA GAAGTACGGC GACCATCGTC GAGGCGGCGC AGGCAGTCAT CAAGGAAAGC GCTTTCCCGT CGCCATTGGA CCTCGTCGCG AACACCCCGG GTGGACGTGA CGTCGCGATC GTCGAGGCAA ATGACGATCG CGAAGAGGCC GAATTCATAG CTTTAGAGGC GCGCAAGTCA GTCAAGGAGG ACCCGGATTT ACGGTATTCA GAAATCGCTG TCTTGTATCG AACCAACTCG CAGGCTCGAG TGCTCGAGGA AGCGTTTATT CGTGCGGGCG TACCGCACAA AGTTATCGGC GACACATCGT TCTACGGTCG TAAGGAGATT AAAGATATGA TCGCGTACCT GCGCGTGGTG TCCAACTCGG CGGACACGGT GAGTCTGAAC CGAATCATCA ACACGCCAAC GAGAGGCATC GGGAACTCAA CCATCGAAAA GCTCAGCGCA TGGATTGATA CGCTTCCGAA AACAGATGGC GTTCCACCGT CAATCGGCGA CGCCCTGTTC AACGGCGCTT GGAGAACCAA AGGCGACGAA GGGCAGACCG AACTGCTGCC GAGCGCGGAG GAAATGGGAT TGACGACGCG CGCGAGATCT GCTGTACTAA AATTTTCACA GCTCATGGCG GAAACCCGAG AGAAGGCGAA AAGCTCGACA CCGGGCGAAC TGCTGGAAGC GATTATCAAA TGTACGGGTT ACGACACCCT CGTGCAAGAT GCCGACGATG GCAACGAGCG TTGGGCGTTT GTGCAGGAGC TCATCAACTT GGCGAAAGAG CCACCGCAAG ACATTGACGA AACCATCCAG GATCGCGTTG GCCTGGAAGC TTTAGGTTCG TTTTTGGAAG GCATATCGTT ACTCACGAGT GCCGAGAGCA AGGAAGAAGA AGGAGGAGAC ACGGTCAAAC TTATGACCAT GCACGCGAGT AAAGGTTTGG AGTTCAACAG CGTATTCATT TCTGGCGTCG AGGAAGGGTT GATTCCTTTT GTGCGTAACG GCGATAGTGA AGACGACCAA GATGAAGAAG TTCGCCTGTT TTACGTCGGC ATCACACGTG CGAAGCGCAA GTTGATGTTG TGTCACGCGC GCGAGCGCCG AAGGTTTGGG CAGAGCGCGC AACCGGCGAG GCGTTCGTTT TTGCTCGACA GTATCTCGGC GATGCTCACT GGATCGAAGA AACCGGAGCG CTCGGTGTCG ATACCGTCGA CTTCGCGCGG TAAGGCAACA
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Protein sequence | LNDDQRAAVL APVGATRVLA GPGSGKTHVL IGRVAHLIHE LKTPPREILC ITFTNKAARE LRERLRDKIG DAAAREITAG TFHSVAARML RRHGDRIPGI GRTGEFTIYD ADDSKQIVQG VLVNKFGETK KTAQPGPMRN WISTSKSCPI PPMSHERFVE CYDEYELGLR QANAFDFDDL LSATVAMLEM CPDVRSYYEH RWSQVLVDEF QDTSTTQYEL IRKLSQPQGS VFVVGDADQA IYGWRGAEVA NIRTQFDEDF KDVQTHMLTT NYRSTATIVE AAQAVIKESA FPSPLDLVAN TPGGRDVAIV EANDDREEAE FIALEARKSV KEDPDLRYSE IAVLYRTNSQ ARVLEEAFIR AGVPHKVIGD TSFYGRKEIK DMIAYLRVVS NSADTVSLNR IINTPTRGIG NSTIEKLSAW IDTLPKTDGT ELLPSAEEMG LTTRARSAVL KFSQLMAETR EKAKSSTPGE LLEAIIKCTG YDTLVQDADD GNERWAFVQE LINLAKEPPQ DIDETIQDRV GLEALGSFLE GISLLTSAES KEEEGGDTVK LMTMHASKGL EFNSVFISGV EEGLIPFVRN GDSEDDQDEE VRLFYVGITR AKRKLMLCHA RERRRFGQSA QPARRSFLLD SISAMLTGSK KPERSVSIPS TSRGKAT
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