| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_38791 |
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| Symbol | |
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| ID | 5002134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009359 |
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| Strand | + |
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| Start bp | 288023 |
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| End bp | 289129 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | |
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| GC content | 60% |
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| IMG OID | 640417555 |
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| Product | predicted protein |
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| Protein accession | XP_001417727 |
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| Protein GI | 145346505 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0409062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGCG TCGACGTCGT CAACGTCGAT CTGGGCGATC GATCGTACCC GATCTACGTC
GGGACGGGGC TGCTGGACGA CGGGGACGCG CTGCGCGCGC ACGTCGCGGG GTCGACGGCG
CTCGTGGTGA CGAACGAAAC CATCGCGGGG CTTGGATACC TCGATCGCAC GGTGAAAGCG
CTCACGGCGA AGGATTCGAA ACTGCGCGTG GAGACGGTGG TGCTGCCGGA CGGAGAGGAG
CATAAGAATT TGGAGGTGCT GAACGCGGTG TACACGAGGG CGCTGGAGAC GCGACTCGAC
CGCGGGACGA CGTTCGTGGC GCTGGGGGGG GGCGTGATCG GTGATATGAC GGGATACGCC
GCGGCGTCGT ATCAGCGCGG GGTGAAGTTC GTGCAAATAC CGACGACGGT GATGGCGATG
GTGGATAGCT CGGTGGGGGG GAAGACCGGG GTGAACCACG CGCTCGGGAA GAATATGATC
GGGGCGTTTT ATCAGCCAGA GTGCGTTTTG ATCGATATCG ATTCGTTGAA GACGCTTCCC
GATCGAGAGT TCGCGAGCGG GATCGCAGAG GTGGTGAAAT ACGGTCTCAT TCGCGATGGG
CCGTTTTTCG AATGGCTCGA GGCGAACGTC GATAAGCTTC TCGCGCGCGA TACGCAAGCC
ATCGCGTACG CCGTCGAGCG ATCGTGCGTG AACAAGGCGG AAGTCGTCGC CGCGGATGAG
AGGGAGGGCG GCGTTCGAGC GACGCTGAAT CTTGGGCACA CGTTCGGTCA CGCGATAGAA
ACCGGTCTCG GCTACGGCGA GTGGTTGCAC GGCGAAGCGG TGAGCGCCGG TATGTGTATG
GCGGCGGATA TGTCTCTTCG ACTCGGTTGG ATCGACGCCT CGCTCAAGGA GCGCACGATC
GCCTTATTGA ACAAGTGCAA AACCCCGATC GACGTCCCTG AAAAGATGAC GGTTCAAATG
TTCATGGACT TGATGGCGGT GGATAAGAAG GCTGCGAATG GGAAATTGCG CTTGATTTTG
TTAAAGGGCG AGCTCGGCGA GTGCGTCTTC ACTGGGGACT TCGACCAAAG CAAGCTCCAG
GAAACCTTAG ACGCGTACGT CAAGTAA
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| Protein sequence | MDGVDVVNVD LGDRSYPIYV GTGLLDDGDA LRAHVAGSTA LVVTNETIAG LGYLDRTVKA
LTAKDSKLRV ETVVLPDGEE HKNLEVLNAV YTRALETRLD RGTTFVALGG GVIGDMTGYA
AASYQRGVKF VQIPTTVMAM VDSSVGGKTG VNHALGKNMI GAFYQPECVL IDIDSLKTLP
DREFASGIAE VVKYGLIRDG PFFEWLEANV DKLLARDTQA IAYAVERSCV NKAEVVAADE
REGGVRATLN LGHTFGHAIE TGLGYGEWLH GEAVSAGMCM AADMSLRLGW IDASLKERTI
ALLNKCKTPI DVPEKMTVQM FMDLMAVDKK AANGKLRLIL LKGELGECVF TGDFDQSKLQ
ETLDAYVK
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