Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_24530 |
Symbol | |
ID | 5002125 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009359 |
Strand | - |
Start bp | 256992 |
End bp | 258346 |
Gene Length | 1355 bp |
Protein Length | 218 aa |
Translation table | |
GC content | 66% |
IMG OID | 640417546 |
Product | predicted protein |
Protein accession | XP_001417969 |
Protein GI | 145347002 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00133033 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CGCGACATGG GCGACTCCGC CGCGGGCGAC GCCAGCGCGG GCTCCAAGAT CTTCGTCGGT GGACTCGATC GAACCGTCGA TGAAGGTGCG ACGCGATCGC GCGGGACGCG CGCGCGCGCG ACGACGACGG ACGCGACGCG ACGCGCGATC GATCGCGCGA TCGGTCGATC GCGCGCGACG GGACGATTCG CGATGCGCGA TTCGACGCGG TGATCGAGCG CGCGGGGACT GACGAGACGA CGACGCGAAC GGACGCAGGC GTGGTGAGAA ACTTTTTCTC GCAGTTCGGG CCGGTGATGG AGGTGCGCGA CGCGAGAGGC GAGCGCGGCG CGCGATCGAC GACGCGTCGG GGGGGCGCTA GGGTTTTCGC GATCGCGTGT GGGCGTATGC GCAAACAGTG CGGAAACAGT TCGCGCGCGG GCGAAGATTG CGCGATCGAC TGACGATTTT TCCCCTCGGA AAACAGGTGC TGGTGATGCG CGACCCGCAC AACCATCAAA GCCGAGGATT CGGGTTCATC ACGTTTCAAC GGGATGATTC CGCGAAGCAA GTGCTTCAAA ACCGATACCA CGACATGCTC GGTAAGCGCG TGGAGGTGAA GAGCGCGGTG CCGCGAGGAC AGGCGCCGCC GCCGCAGCGC GGACCGCCGA GGAGCTCGCA AGGGTACGGA TACGGCCAGC CTCGCGGGGG ACCGGGCGGT GCCGCGGGAC CCGGGTATGG GTACAGCGGA CAGCAATACG GCGCACCGCA AGCCGGCGGT GCGCCGGGCG CGTACGACGG GGCGAACCCT TGGGGGACCC TCGGCGGCGA CGCCGCGGGC GGACAAAAGC CCGGATACGG GTACGCCGGC GACGGTTCCA AGCCTCCGGG CGGCACCGCC GATGCGTCCA GCCACGGTTG GACCGAGCAC ACCGCACCCG AAGGGTACGT GTACTATTAC AACAGCAGAA CAGGTGTGAG CCAGTGGGAG CGACCCATGG AGCTCGACTT TCCGAAGTAA TCCCTCGGAA GGGCGCCTCG GAAAACGTTG GGCGCGTCGC CGCGCGCACG CGTTCGTCTA TCGTCCCTCT TCGTCCTCGT CGGCACCGTC CGACGACGCG AGAGCGACGA TGTATTCGAT CTCGCGCGCG CGCGTCGCGC CATCTTAAAG ATCTAGCCAA TAGATCTAGC GAGTAGTCAC GGGCGCGCGT CGCTTAGCAA GCACGCGCGG GCCCCCGTAG CGCAACATAG TACACGGACT AGCGCACACG AGACGTCGAC GCCATCGACG CGAAACGCTC GTTTCGCCGA CATCGTCCGC GCGTCTCCTG TTCAAGTAGA GAACACTGAT AGAAGTTTAA CGCACGTTTG TTCAA
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Protein sequence | MGDSAAGDAS AGSKIFVGGL DRTVDEGVVR NFFSQFGPVM EVLVMRDPHN HQSRGFGFIT FQRDDSAKQV LQNRYHDMLG KRVEVKSAVP RGQAPPPQRG PPRSSQGYGY GQPRGGPGGA AGPGYGYSGQ QYGAPQAGGA PGAYDGANPW GTLGGDAAGG QKPGYGYAGD GSKPPGGTAD ASSHGWTEHT APEGYVYYYN SRTGVSQWER PMELDFPK
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