Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_2293 |
Symbol | |
ID | 5001771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009359 |
Strand | + |
Start bp | 604440 |
End bp | 605735 |
Gene Length | 1296 bp |
Protein Length | 432 aa |
Translation table | |
GC content | 54% |
IMG OID | 640417192 |
Product | predicted protein |
Protein accession | XP_001417819 |
Protein GI | 145346694 |
COG category | [A] RNA processing and modification [T] Signal transduction mechanisms |
COG ID | [COG5238] Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.531902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTGT ACGTCAAGAA GGCGGCTGAG CTCATGAAGG AAGTCGTCGA ATCTGGAGCG CAGGAAGGCG ACGGCGACGC CGCTGGTGAC GTGGAGATGG ATGGTGATGA ATTCGACGTC GGTAAAACGA GTAAGGATCG GGAATTCTAC ACCCAACAGC GCGCGGAACA AGTGTTGGCG CCGTTGTTGA ATAAAGGCGC TTCGTACTCC AAGGTTCGAC TGAGCACGAA GAGTTTCGGT ATCGATGCCG CCAAGGTGGC GAGCCGAGCT TTTGTGAATT TGGCGTCAAC GTTGAAGGAA GTGGACTTAA GCGACACCAT CGCGGGGCGT CCCGAAGTCG AAGCATTGAA GGCAATGGAA ATTTTCAGCG AGGGCTTGCT CGCGGCCAAG TTGACGTCGG TGGATTTGAG CGATAACGCG TTTGGTGAAA AGGGTGTTCG TGCGTGCACG AAGCTTCTTC AAGGACAAAC CGAGTTGACT TCTATCGCGT TTTTGAACAA CGGAATCTCT GAACAGGCTG CGCGTGCCAT TCTTGAACTG CTTGCGTGCC CAGAAAAGCT CACTCGTTTC CATTTAGACA AGAACATGAC GGGCAACGAA GGCACCGTGC ACATCGCCGC CATCGTCGCG AAAGCGACAG GTATGAAGGA TTTCAAGATG GCGGGTTCTC GTTTCTTCTG CGAGGGCGCG ATTATGCTTG CTGAGGCGCT TTCGCACGGG AATTCTCTGG AGAGACTCGA CTTGAACGAT AACAACGTCA ACGAGGAGGG CGCAGAAGCG CTCGTCAAAG TGTTGCCAAA GCATCCGAAC CTTCAGTTCT TGAACCTCGA AGCGACGGCA TTAGGACCGG ACATGGGTGG AACTCTTCTC ATGGCCGTAG CCAAGGGTTG CCCGAAGCTC GAAGTTCTCC ACGTTAGCAG TAATGACTTT GAGCGAGAAG GCGCAGAAGC CGTCGCCCAC GCCATCGCAG AGATGAAAAA CCTCAAGGTT TTGACAATCG GTGATAACAT ACTTGGTGAC TATGGGTTTA CGCAAGTGTG CATGGCTTTG AGTCAATCGA ACGCGCCTCT CGTGAGACTC GATGCGAGCT GCAACGAACT CCAAAAGTCA GGCGCCATCG CGGCGGCGCA ACTCGCGGCG AGCAAGCCAG GATTTGAGCA TCTCAACCTC GACGGTAACA TGATTCCTGA AGACACCGTG GAAGAAATTC GCGCTATTTT GTCGGCGGCC GGTATCGAAC ACGCACTCGC ACCGATGGAA GATAACGATC CCGAGGGTGA GGCGGATGAT GAAGAA
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Protein sequence | MRLYVKKAAE LMKEVVESGA QEGDGDAAGD VEMDGDEFDV GKTSKDREFY TQQRAEQVLA PLLNKGASYS KVRLSTKSFG IDAAKVASRA FVNLASTLKE VDLSDTIAGR PEVEALKAME IFSEGLLAAK LTSVDLSDNA FGEKGVRACT KLLQGQTELT SIAFLNNGIS EQAARAILEL LACPEKLTRF HLDKNMTGNE GTVHIAAIVA KATGMKDFKM AGSRFFCEGA IMLAEALSHG NSLERLDLND NNVNEEGAEA LVKVLPKHPN LQFLNLEATA LGPDMGGTLL MAVAKGCPKL EVLHVSSNDF EREGAEAVAH AIAEMKNLKV LTIGDNILGD YGFTQVCMAL SQSNAPLVRL DASCNELQKS GAIAAAQLAA SKPGFEHLNL DGNMIPEDTV EEIRAILSAA GIEHALAPME DNDPEGEADD EE
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