Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_15488 |
Symbol | SDG3509 |
ID | 5001892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009359 |
Strand | + |
Start bp | 521505 |
End bp | 522977 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | |
GC content | 60% |
IMG OID | 640417313 |
Product | predicted protein |
Protein accession | XP_001417799 |
Protein GI | 145346652 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.427459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000333218 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGTCCA AACCCGCGTC TTCGAAGTCC GCGGGGAAGC GCGCGGCGGA AGCGCGCGGG CGCGACGCGG GCGGCGGCGG CGGCGGCGCC TTTGCGAAGT GGCTTCGGGA CAACAAAGTT GAGCTCGACG GCGTGGAGGT GGCGCGATTC GCGCGCACGG GGCGCGGCGT GCGAGCGACG CGTGATTTGC GCGTCGGTGA AGTCGTCGTG AGCGTTCCGG ACGATGCCGT GCTCACGGTG GATGCGTGCG CGGTGAAGAA GGAATTGGGG GAGTTCGTCG GCGACGGGGA CGACGAGGCG CCGTCGCCGC GGCTGGATAA AGAGCTGTTG GTCATCGCGG TGATGTGCGA GATGTGCGCG GGTAAGTCGA GCGCGTGGTG TGAGTATTTG GAGACCGTGC ACGAGGCCGT GCGCGTCGGA CACTCCGTGT TGGCGTGGGA CGACGAACAG GTGACGGCGC TCTTCGGCAC GGACGCGTGG CGAGACGCGT ACGAAAACGA CGACGAGACG CTCGACCTTC CGATGATGAC GGAGGAGCAT TTTGAAAACG TTGTTACACT GTTTTTCAAG CTCTTTCCAA AACTGGCGAG CGGACTTTCT GTGGAAGCGC TGCGCGAACT TCATTTCGCG GCGACGGCGA TGGTGGCGGG GTACTCGTTC ACCCTTGGCG ACGACGAGAT TCAGGCCATG GTTCCGTTCT GGGACATGCT CAATCACGCG CCACCGTGCG AGGCTTCGGT GCGGCTGCAT CACGATCAAA AGAATGGATG CTTGCAAATG ATTACCGTGC GTGGAGTGAA GAAGGGCGAG GAAGTGTTCA ACACGTACGG GCCGCTGCGA AACGCCGAGC TGTTGCGACG ATACGGCTTC GTTTTGCCGC GGAACCCGCA CGGTGGTACC ACGGTAGGCT TGGCCGAGGT GATTCAGGCT GCCATGGGGG CAAATCCGCT CGTTGTGGAC GAGCTGCCGC TTCGTTTAGC ATGGCTCGAG TCTCGCGGTT TGGCGGACGA GGAGCTCAGC ACGAGATTCT TCGTGCACCG GACTGGACGC CCGAGCGATA AACTTTTAAT CGCGATGCGT TTGCTCACGC TTAAGCCGGA AGAGATGACG GCGCTCATAG AAGCCGACTT TGATGACGAA GAGCAGTTGA TGCTTTTAGA AGGAAACGAT GAAGAACGAA CAGAGCAGTC ATACATGGTC GGCGCGTCGT TGCAATTTTT GGGCATGTAT GCCAAATCGC GTTACGCCGA GTCCATGAAG GCGTCTCGTT TGACGTATAA AATGTACGCC AGTGTGTCGC CGCATGTGCA GAAGCATGAG AGTATCTATC GTGCGTGGGC CGCCGCTGTG GTGCGCATGG ATGAGCAGCG TGCGTTGACG AAGCTTGGAC GATGGACGTA CCACCCCGGA CGATCCGAAG ACGCGCTTTT GCACGCGTGG CCGTTTCCCG TGGCAGACGA AGAGGGGAGG TAG
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Protein sequence | MTSKPASSKS AGKRAAEARG RDAGGGGGGA FAKWLRDNKV ELDGVEVARF ARTGRGVRAT RDLRVGEVVV SVPDDAVLTV DACAVKKELG EFVGDGDDEA PSPRLDKELL VIAVMCEMCA GKSSAWCEYL ETVHEAVRVG HSVLAWDDEQ VTALFGTDAW RDAYENDDET LDLPMMTEEH FENVVTLFFK LFPKLASGLS VEALRELHFA ATAMVAGYSF TLGDDEIQAM VPFWDMLNHA PPCEASVRLH HDQKNGCLQM ITVRGVKKGE EVFNTYGPLR NAELLRRYGF VLPRNPHGGT TVGLAEVIQA AMGANPLVVD ELPLRLAWLE SRGLADEELS TRFFVHRTGR PSDKLLIAMR LLTLKPEEMT ALIEADFDDE EQLMLLEGND EERTEQSYMV GASLQFLGMY AKSRYAESMK ASRLTYKMYA SVSPHVQKHE SIYRAWAAAV VRMDEQRALT KLGRWTYHPG RSEDALLHAW PFPVADEEGR
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