Gene OSTLU_12543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_12543 
Symbol 
ID5001829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp382648 
End bp384321 
Gene Length1674 bp 
Protein Length557 aa 
Translation table 
GC content51% 
IMG OID640417250 
Productpredicted protein 
Protein accessionXP_001417756 
Protein GI145346564 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0560437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0167575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTG GTGTGTTGGC GTCTCGTCCC ACCGCACGTG ATATCAAGAT TATCAACTTC 
TCCATGGGTA TGGGTGGTCG CGAGCTCATC AAAGACTGCG ACATCGAAAT CACAATCGGA
AGAAGATACG GTTTACTCGG TCAGAATGGC TGCGGTAAAA CAAACTTTCT CGAGTGCTTG
GCTCGCCGAG AAGTCCCAAT CCCGGATCAC ATTGATTTGT ATCACTTGCG TGAAGAAGCT
CTTCCGAGCG AACGATCGGC GATTCAAACC GTCATCGATG AAGTTCAAGC TGAGATGGAA
CGTCTTAACA AGTTTGAACT GCACATTCTC GAAACTACCG GCCCAGATGA CGAACGTTTG
GAGCTTATTT ACGACCGACT AGAAGAGATC GATCCTACTA CGTTCGAAGC GCGTGCATCT
GAGCTTTTGC ACTCTCTCGG TTTCTCCCAA ACCATGATTC ATCGCCCAAC GGCGGACATG
TCTGGCGGCT GGCGGATGCG TGTCGCGCTT GCCAAGGCGT TGTTTGCCCA GCCCACTCTT
TTGCTGTTGG ACGAGCCAAC GAATCACTTG GATCTCGAAG CGTGCGTGTG GCTCGAACAC
TACTTGGGAC AGTACAAAAA GTGTCTCATA ATCGTTTCTC ACTCGCAAGA TTTCTTGAAT
GGCGTCTGTA CGCACATCAT TTGGTTGACG CAGCAAAAGC TTACATACTA CACCGGTAAC
TACGATACAT TCCAGAAAAC CGTGAACGAG AACAACATCG TGCAGCAAAA GAAGTACGAA
AAGGAGCAAG CTGACATCGC GCACTTGCAA GAATTCATCC GCTCGTGTGG TACGTACTCG
AACATGCGCA AACAAGCCGA ATCGAAGCAA AAAATTATCG ACAAGATGAT GGCCGCAGGT
CTCACACCGC CGGTCGCCAA AGAGCACGAT TTCAAGTTCG ACTTCCCCGA GTGTCAAAAA
GTTCCGCCTC CCGTGCTTCC GTTCGCGAAC GTGTCGTTCT CGTACAATGG TAAGAAGGAG
GACTACTTGT ACGAAGGGTT GGAGCTCGGC GTCGATTGCG ACAGTCGTAT TGCGTTGGTG
GGCCCGAATG GTGCCGGTAA ATCCACTCTT TTAAAGCTCA TGACTGGCGA ACTTTCGCCG
AGTGTGGGTA CGGTCGATAG ACACCCGGGT CTGAGCATCG GTAAGTATCA TCAGCACTCA
GTCGATGTGC TTAACAAGGC GATGACCCCG CTGGAATTTT TCATGGCTGA ATATCCCAAT
AACCTCAAAT TCAAGCGTGA GATGGAAGAG TGGCGTGCAT ACTTGGGGCG CTACGGCGTC
AGCGGGCGCA TGCAAACGCA GAAAATTGGC GAGTTGTCGG AAGGTCAACA GTCCCGTCTC
GTGTTTGCCA TGATTTGCAT GCAGCGTCCG AACTTGTTGC TTCTCGATGA GCCGACGAAT
CACTTGGATT TGGAAGCGAT CGATGCGCTC GCAGAAGCCA TCAAGCGATA CAACGGTGGG
CTGGTGCTCG TGTCGCACGA TTTCCGTCTC ATCGACCAGG TCGCGGACAA GATTTGGGTG
TGCGAGAACA AAACGGTGCG CGATTGGAAA ACGGATATCA GAATGTACAA GAAGCACTTG
AGCGACAAGG CGGATCGCGA AGCGCGCGAG CGCAAGGCCA AGGTTCGCAA ATAG
 
Protein sequence
MSTGVLASRP TARDIKIINF SMGMGGRELI KDCDIEITIG RRYGLLGQNG CGKTNFLECL 
ARREVPIPDH IDLYHLREEA LPSERSAIQT VIDEVQAEME RLNKFELHIL ETTGPDDERL
ELIYDRLEEI DPTTFEARAS ELLHSLGFSQ TMIHRPTADM SGGWRMRVAL AKALFAQPTL
LLLDEPTNHL DLEACVWLEH YLGQYKKCLI IVSHSQDFLN GVCTHIIWLT QQKLTYYTGN
YDTFQKTVNE NNIVQQKKYE KEQADIAHLQ EFIRSCGTYS NMRKQAESKQ KIIDKMMAAG
LTPPVAKEHD FKFDFPECQK VPPPVLPFAN VSFSYNGKKE DYLYEGLELG VDCDSRIALV
GPNGAGKSTL LKLMTGELSP SVGTVDRHPG LSIGKYHQHS VDVLNKAMTP LEFFMAEYPN
NLKFKREMEE WRAYLGRYGV SGRMQTQKIG ELSEGQQSRL VFAMICMQRP NLLLLDEPTN
HLDLEAIDAL AEAIKRYNGG LVLVSHDFRL IDQVADKIWV CENKTVRDWK TDIRMYKKHL
SDKADREARE RKAKVRK