Gene OSTLU_31116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_31116 
SymbolRPL8 
ID5001321 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009358 
Strand
Start bp329780 
End bp331029 
Gene Length1250 bp 
Protein Length255 aa 
Translation table 
GC content61% 
IMG OID640416742 
ProductRibosomal protein L8, component of cytosolic 80S ribosome and 60S large subunit 
Protein accessionXP_001417217 
Protein GI145345437 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.155376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCGCG TCATCCGAGG TTGCCGTAAG GGTAAAGGGT CGGTGTTTAC CTCCCACACC 
CACACCCGCA AGGGCGCGGC GAAGCATCGC CAACAGGTGC GTCGACGACG ACCGGCGCGC
GACGCCACGG GACGCGCGAT GGCACCGCGA TCGCGACGCG CGCTCGAGGA TTGGCGCGCC
GTGCGCGCGC GATCGACCGC TCGAAGCGCG GTGATGGGTG ATGGAATATG CGTGTTATCG
AATCGCGTCG ACGCGCGCGA TGGGGACGCG TCGGCGCGCG CGCGACGGGG TGAAACGTGG
ATGGAGTTGT GAAAGACCTA AGACGGACGA CTGACGATGG GACTCGACGC CGCGACGCAG
GATTACGCCG AAAGACACGG TTACGTCAAG GGCGTGGTGA CGGATATCAT TCACGACCCG
GGTAGAGGCG CGCCGTTGGC CAAGGTGCGT GTTTGCGATG TGTTCGACGG CGCTGACGCT
CGATCGTCCT CGACGGGAGT AGGGCTTTGG ACGCGCGAGG CGCGCGCGCG CGGAGGGACG
TGCGTTCGAC GCGAGGGAAG ATTCGAACGC CCCTGTGCGT GTTTGAATCA GTGACTGACG
ATGTTATAAA CTTTTTCGTG CGATGTGTAG ATGACGTTCC GTCACACCAA GCGTTACGGT
CTCCAAAAGG AGCTCTTCAT CGCGGCGGAA GGGACGTACA CGGGTCAATT CGTGTACGCC
GGTAAGAAGG CGCAGTTGGC TATTGGTAAC ATCTTGCCGA TCAGCTCTAT GCCGGAGGGT
ACGATCATTT GCAACGTTGA GTCCAAGCTC GGTGATCGTG GTACCTTGGC CAAGGCGTCT
GGCGAATATT GCATCTTGAT CTCGCACAAC CTCGATACGG GTTTCTCCCG CATCAAGCTT
CCGTCTGGGG CCAAGAAGAC GATTCCTTCC GGTTGCCGCG CGACGGTTGG TCAAGTTTCG
GGTGGTGGTC GCTGCGATAA GCCCATGCTT AAGGCTGGTG CGAGCTACCA CAAGTACAAG
GTCAAGCGCA ACAGCTGGCC GAAGGTTCGT GGTGTGGCTA TGAACCCGGT TGAGCACCCT
CACGGGGGTG GTAACCACCA GCACATCGGT CACGCGTCCA CCATTCGTCG CGACCGTTCG
GCTGGTGCCA AGGTCGGTCT TATTGCCGCC CGACGCACTG GTCGTCTTCG TGGGGCGAAG
CCTTCCGAGG CTGACTAGAT TTCACCGTAA TACGACTCTC TCGAGATTCC
 
Protein sequence
MGRVIRGCRK GKGSVFTSHT HTRKGAAKHR QQDYAERHGY VKGVVTDIIH DPGRGAPLAK 
MTFRHTKRYG LQKELFIAAE GTYTGQFVYA GKKAQLAIGN ILPISSMPEG TIICNVESKL
GDRGTLAKAS GEYCILISHN LDTGFSRIKL PSGAKKTIPS GCRATVGQVS GGGRCDKPML
KAGASYHKYK VKRNSWPKVR GVAMNPVEHP HGGGNHQHIG HASTIRRDRS AGAKVGLIAA
RRTGRLRGAK PSEAD