Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_31108 |
Symbol | psaF |
ID | 5001319 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009358 |
Strand | + |
Start bp | 311858 |
End bp | 313180 |
Gene Length | 1323 bp |
Protein Length | 232 aa |
Translation table | |
GC content | 68% |
IMG OID | 640416740 |
Product | psaF, PSI-F, subunit III, photosystem I polypeptide |
Protein accession | XP_001417212 |
Protein GI | 145345427 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.000169321 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGCGACGCGC ACGGGACTCG CGCACGATGA ACGCGCTCGC TCAGGTACGC GTCGGTTCGC GCGTCGTCGG CGCGCGCGAC GCGACGCGAC GACGCGCGCG CGCGACGCGA GGGACGGCGC GCGCGCGATC GGCGTTCGAA ACGATCGGTC GATCGCGCGC TCGTCGCGTC GTCGCGTCGC GCGCGCGATG GACGCGCGGC GGCGATCGGG CGTCGGGTGG GGGCCGACGC GCGATCGCGC GGGCCGCGCG CGGCGCGGCG CGGACGCGCG CGAGACGCGG CGTCGATCGA GGGCGGACGC GCGCGATCGG TGGATCGCCA CCGCGGGGCG TCGAGCGGGA CGACGGAGGC GGCGCGGGCG CGGGCGCGAG GCGGATTCGG GCGGCGCGCG CGACGCGAGA GGGCGCGGAC GCGGTGGCGC GCGAGGTCGG GAGGGCGGGG CGCGCGGGCG AAAGGGCGCG CGCGACGACG AAGGCGAGCG CGGGGACGAG GGCGAGGCGC GAAGACTGAC CTAGAACGGA TTCGACGCGT CGACGCAGGT TCAACTCTCC AGCAAGGTGA CCGTTTCTGG TCTCAAGCAA ACCGCGCGCG TGAACGCGCG CACGGTGAAG ACCGCCGCGC ACTGCTCCGC CGCCGATGTG ACGCGCAAGG CGGCGTCCTT GGCCGTCGCC GCCGCCGTCG CGGCGACGCC GTTGGTCGTC GTCGAAGAAG CCTTCGCGCG CGACGTGCAA CCGTACGCCG GTTTGACCCC GTGCAAGACG TCCAAGGCGT TCGCAAAGCG TCAAAAGACC GAAATTAAGG CGCTCCAAAA GCGTCTCAAG AAGTACGACC CGGAATCCGC CCCGGCGCTC GCCCTCAACG CGACGATCGA AAAGACGAAG ACGCGATTCG CCAACTACGG CGAAGCCGGT CTCCTCTGCG GTAAGGATGG TCTCCCGCAC TTGATTGTTG ATGGTAACCT CGAGCACCTT GGCGAGTTCG CCGTGCCGGG CTTGGGTTTC CTCTACGTGG CGGGCTGGAT TGGCTACGCG GGCCGCTCCT ACGTTCAAAT GAACAAGGAA ACCGCCGCCA AGCCGACGCA AGGTGAAATC ATCATCGATG TCCCGAAGGC GCTCGGCTTG ATGTTCCAAG CGGGTGCGTG GCCGCTCCTC GCCGGTCTTG AGCTCAAGAA CGGTACGCTC ACGGCGCCGG AGAGCGAGAT CACCGTCTCC CCGAGATAAG CGACATAGTA GAAACTCTCG AGCGCTTGCT GTACGATCAC GAGGACCTTC CTTTATTAGT CAGAAGAAAC GCGATTTGTG ATTGCCAAAC ATAATGCTTC TTT
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Protein sequence | MNALAQVQLS SKVTVSGLKQ TARVNARTVK TAAHCSAADV TRKAASLAVA AAVAATPLVV VEEAFARDVQ PYAGLTPCKT SKAFAKRQKT EIKALQKRLK KYDPESAPAL ALNATIEKTK TRFANYGEAG LLCGKDGLPH LIVDGNLEHL GEFAVPGLGF LYVAGWIGYA GRSYVQMNKE TAAKPTQGEI IIDVPKALGL MFQAGAWPLL AGLELKNGTL TAPESEITVS PR
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