Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_15071 |
Symbol | |
ID | 5001259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009358 |
Strand | - |
Start bp | 526019 |
End bp | 526732 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | |
GC content | 58% |
IMG OID | 640416680 |
Product | predicted protein |
Protein accession | XP_001417530 |
Protein GI | 145346095 |
COG category | [R] General function prediction only |
COG ID | [COG1266] Predicted metal-dependent membrane protease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.00688834 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCAGT TGGGGGTGGA TCCGGCGAAG ATGGACGCGA ACGCGCAAGC CGAGTACTTG CTCGCGGTGC AGTGCGCGGA GACGGTGGTG AGTTTGAGCT TGGTGTACGC GCTCGTGTCC CCGCACATGG ATGTGGTAAA AGATGAGTCC AAGGACTGGT TTAAGTTTGA TTTTAGCGAT CCGTTCGAAC GCGAGCGGGG ATGGGCCAAG TACGGATTGA TCGGATATGG GACGACGTTT TTAGCGCTCG CGGCGACGGG ATTTGTGCTC GACGTGGCGG AGAAGGCGCA GGGGGGTCAA CAAGCGATCG AGAAGGCGTC TGAGCAAGTG GGCACGATTG ATGGCGTGCT GCCATTGATT TCAAGCGATA ACAACGGCAC TCTTCTCGCT GTGTTGACGG TGACGAGCGT GTTGGCGCCG TTGCTCGAAG AGGTCGTCTT TCGAGGCTTC ATCCTCGCGT CGCTCACGAA GTGGTTGCCG ACGCCCGGCG CAGTGCTCTT TAGCAGCGTT TTGTTCGGGC TCGCGCACTT CGCGCCGCGA GATTTCGTCG AACTCGTCGT CTTGGGGATG GTTTTAGGCT TTAGCTATGC GCGAACTCGC AATTTACTCA CCCCGATGTT AATTCACTCG ATGTGGAACT CGGGCGTGCT CGTCGTCGTC GCCGCCGCCA TCAAGGGCGG CTTCGCGCAC GAATTGGGCA TCCCAGGATT TTAG
|
Protein sequence | MAQLGVDPAK MDANAQAEYL LAVQCAETVV SLSLVYALVS PHMDVVKDES KDWFKFDFSD PFERERGWAK YGLIGYGTTF LALAATGFVL DVAEKAQGGQ QAIEKASEQV GTIDGVLPLI SSDNNGTLLA VLTVTSVLAP LLEEVVFRGF ILASLTKWLP TPGAVLFSSV LFGLAHFAPR DFVELVVLGM VLGFSYARTR NLLTPMLIHS MWNSGVLVVV AAAIKGGFAH ELGIPGF
|
| |