Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_34199 |
Symbol | |
ID | 5000688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009357 |
Strand | - |
Start bp | 127901 |
End bp | 129316 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | |
GC content | 57% |
IMG OID | 640416109 |
Product | predicted protein |
Protein accession | XP_001416852 |
Protein GI | 145344673 |
COG category | [A] RNA processing and modification [T] Signal transduction mechanisms |
COG ID | [COG5238] Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.499516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGGC CGGTGTCCGT GGCGCCGAAG CAGCAGCAAC AACAGAAGAA GATCATCACG CGCGAAGCCA AGCGCATGCT TCGCGACGTC ATGGACGAAC TGCGACGGGT GCAAACAGTC GACGCGAGTG GTAAGAATCT CGGTGACGAA GGTACGTGCT TCATCGCCGA AGCGTTCGCG TACAATAACG TGGCTACGTG CGTGGACATG AGCGCGAACG GCATCGGCGT CGAGGGCGTC ACGGCGCTTT GCGAGGCGCT GAAGTGTAAC GACACGCTGA CGATGTTGTC GCTCGCGAGT AACTCGCTGG GCGACGAAGG TGCGAAGGTG TTGGCGGACT ATCTCAAGAC GGATGAAAAG ATTACAACCA TCAACTTGAA CGCGTGCTCG ATCGGCGACG AAGGCGCCAG GGCAATCGCC GAGGCGCTCA AGACGAACAC CACCATCACT TCCCTCGAGA TGAACAACAA TATGGTCGAT TACGAAGGTT CAGGCGCGCT CGCTCAGGCG TTTGCGCAGA ATAGCACGGT GGAGTTGCTC GCTCTGAGCG GCAACTACGT CGGCACTCTC GGCGCCGCGG CGCTCGGCGC CGCGTTCAAG GAGAACACTG GGTTGCGCTC TCTCCAATTG AACGGAAACG ACATAGGCAA CGAAGGTTGC ATCAAGCTCT GTGAGGGACT GGCGGCGCGC AAAGATAAAA TTAACAACTT GGACCTCGGC AACAACTCCA TCGGCCCCGA AGCAGGACCG GCGCTTCGCG ATTATCTCAA GGACGACGAC GCGTTGACGC ATCTCAACCT GTACATGAAC GAGCTCGCAA ACGACGGCTG CGCCGCTGTC GCCGAATCGC TCAAAGATAA CAAGAAGATA GAGCTTCTTG ATATCGGTGG GAACAACATC GGCGCTTTCG GCGCCGAGAA GCTTGCTGAA GCGTTGCGAG ACAACGAATC CTTGGTGACG CTCGAACTCG GGTACAACCC GATCGGTGTC CCCGGTGGCA AGGCTCTCGC AGAGACGGTG AAATTTCATG GTAAATTAAA TACCATGCGT ATGGGCTGGT GTAAAATTGG CAAGGAAGGC GGCTTCGCAT TCGCGGATGC GATCAAGTAC TCGAGCTCGC TCGCGGTGTT GGATTTGCGC GGCAACGACC TTGGCGACGA CGGCGTTGCG GCGCTCGCGC AGTCGCTCGG CGTCGTCAAC GAAGTATTGA CCAACCTCGA CCTCGGTTAC AACGAAATCA AGGACAAGGG CGCTTTCGCT CTGGCGCAGG CGATCAAGAA CAATGCAGAC GGTTCCTTGC AAACGCTCTC CATCAACAAC AACTACTTGA CCAAATTCGG CGAAGTCGCC CTCACGGAGG CGGTCGAGTT GGTTCAGGAA ATGAACGCCG ATCGCGACCT GTACGTGCAG TTCTAA
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Protein sequence | MDGPVSVAPK QQQQQKKIIT REAKRMLRDV MDELRRVQTV DASGKNLGDE GTCFIAEAFA YNNVATCVDM SANGIGVEGV TALCEALKCN DTLTMLSLAS NSLGDEGAKV LADYLKTDEK ITTINLNACS IGDEGARAIA EALKTNTTIT SLEMNNNMVD YEGSGALAQA FAQNSTVELL ALSGNYVGTL GAAALGAAFK ENTGLRSLQL NGNDIGNEGC IKLCEGLAAR KDKINNLDLG NNSIGPEAGP ALRDYLKDDD ALTHLNLYMN ELANDGCAAV AESLKDNKKI ELLDIGGNNI GAFGAEKLAE ALRDNESLVT LELGYNPIGV PGGKALAETV KFHGKLNTMR MGWCKIGKEG GFAFADAIKY SSSLAVLDLR GNDLGDDGVA ALAQSLGVVN EVLTNLDLGY NEIKDKGAFA LAQAIKNNAD GSLQTLSINN NYLTKFGEVA LTEAVELVQE MNADRDLYVQ F
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