Gene OSTLU_30354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_30354 
SymbolMRPS1 
ID5000598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp53825 
End bp54934 
Gene Length1110 bp 
Protein Length352 aa 
Translation table 
GC content61% 
IMG OID640416019 
ProductPutative mitochondrial ribosomal protein S1 
Protein accessionXP_001416831 
Protein GI145344629 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0824042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGACGATGGC GACGACGGCG ACGATGGCGC GTCGCGGCGC GGCGACGGTG ACGACGACGA 
CGACGACGAC GACGCGGGCG CGACGAGGCG CGCGCGCGAC GAAGCGACGA GGGACGACGC
GGGCGAGGGC GAACGCGGAG GCGGGCGGCG ACGCGAAGAA CGCGCGCGAA CAGGACGTGC
GCGCGGCGAT CGAGGCGATC GAACGCGACG GAGGGCGACT CACGGGGAAG GTGGAGGTGG
TGAATCGCGG CGGGGTGGTG CTCAGGGTGA CCAAGGGACG CTTTCGGGCG TTTTTGCCGA
AGAGCCAAAT GCGATCGAGT CGCCTGCGGG GCGACTTCAG GGGGGGGGCC GAGGAGGCGG
ACGAGACGAA GATGCTCGAG GCGCAGATCG GGAAATTGAT CGACGTGAAG TTGGTCGATC
ACTCGTCGAA GCGGATCGTG GTGAGCGAGC GAGCGTTGTT GCAGGAACGG GCGAGCGAAA
AGTTACCCGT GGGCGACGTC AAGGAGGTCG TCGTCACCTC GTTGAGCGAT TTTGGGGCGT
TCGTGGAGGT GTGCGACGGT CAAGGCGAAG CGAGCGGGTT GGAGGGATTG GTGCACATCT
CTGAGATCTC GTGGAATAGA ATTAGTCACC CGAGAGACGC GGTCAAGGTT GGACAACGCG
AGTTTGTCAA GGTTTTAGAG GTGAACGACG AAACCGGTCG CATCAACTTC AGCATCAAGC
AAACGCAAGC TGATCCGTTG ATGGAGACGT TGGAAACCAT CATGCCGGTG ACGATGCCGG
AACCATCGAT CGATGAGGAC GATTTGAGCG AGATTCCGCT TCCGGGATTG CCGGACATCT
GTAGCTCCCT GCTCAAGGAG GATGGCATCG AAGCCGTCAT CCCGGGTCGC CAAGCGATGG
AACAACGCGT CGTGAGCCAA GACCTCGAGC TTTGGCTCAC GAATGTGTTT GTTGAAGATG
GTTACAACCT GCTCGCGCGC GCGGGACGCC AAGTCCAAGA AATTCACGTC GTCACGCGTC
TCGACAGAGA CGCCATCAAG CGCGCCATCA AGCGCGCCAC GAGCGTGGCC AAGTCTCAGT
AAAGTGATTT ATTGTCGTCA GTCATTTTTT
 
Protein sequence
MARRGAATVT TTTTTTTRAR RGARATKRRG TTRARANAEA GGDAKNAREQ DVRAAIEAIE 
RDGGRLTGKV EVVNRGGVVL RVTKGRFRAF LPKSQMRSSR LRGDFRGGAE EADETKMLEA
QIGKLIDVKL VDHSSKRIVV SERALLQERA SEKLPVGDVK EVVVTSLSDF GAFVEVCDGQ
GEASGLEGLV HISEISWNRI SHPRDAVKVG QREFVKVLEV NDETGRINFS IKQTQADPLM
ETLETIMPVT MPEPSIDEDD LSEIPLPGLP DICSSLLKED GIEAVIPGRQ AMEQRVVSQD
LELWLTNVFV EDGYNLLARA GRQVQEIHVV TRLDRDAIKR AIKRATSVAK SQ