Gene OSTLU_24208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_24208 
Symbol 
ID5000634 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp297448 
End bp299678 
Gene Length2231 bp 
Protein Length592 aa 
Translation table 
GC content60% 
IMG OID640416055 
Productpredicted protein 
Protein accessionXP_001416615 
Protein GI145344180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00311242 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.163312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG AGGACGCGAT CGCGAGGTAC GAAGCGACGA AAGCCGCGGC GATCGCGACG 
GCGCGGGACG CCGCCGTCAG GGTGCGCGAG GAGGCGACGC GCGCGCAGCG GGTCGTGATG
AACGCGCCGG CGCCCGCGCT GGCGGCGCGC TTCGCGCGAG CGGATGGGTT CGTCGATCGC
GGCGCGTATC CGGTGTTCGT CGAACGCATC GCCGTCGGGT CGGTGATCTT CTCCCAGAGC
TACGCCAGAG ACGCGTGGTT GCACGTGAAG AACAATCACC TGCTCGTGGC GCTGTTCATG
GCGCACCCGA AGCACCCGTT TTCGCGAACG GAGCGCGCGG TTTGTTTGTT TTGCTCGCTC
ATCATGGGAT TCGGGTTGAC GTGCGCGTTT GGTTTGATCG CGGACGAACC GGATAAAACG
GTGGTGAGCG TGATCGTGGG AGGGTTCATT CAGGGGGTGT ACGACGCGTT GTTGAGAATG
TTCGCCGAAT GCATCTGCAT TCAGTCGTGC CCGCGTTGCG TGGTCAACTG TTTCGAGACG
TGCGGGCGGA TCGGGATGGT GCTGCAGTTC CTGCTCGGAA TCTTGGTGCT CTGTATCGGT
TTCTTAGCGT TCGTCACGTC GGAGAGCCTG AGAGCGCTGG GAGGGGTGAC TTGGCGTTTC
GCGATGTCGA AAGCGTCGTC GTGGGTCGTG GCGTCGATGA TCTTTGTGCT CCTGGGACAT
CACCTAGCGC GAAGAAATCA GATGCGGCCG GCGGCGTCGA GGCACACATT CAGCGAAAAA
GAGGCGCACG AGCGCTGGAA CACGCCTCAA GAGCCGTGGT GCTGCTCGTG CTGTCTTCCG
TCTCGCGCTC CGTCTTACTT TTGGAATTAT TACATCGGCG AAGACGTCTC GTTTGAAGAC
TTGCCCATGA AACCGCCAAA GTACGCCGTC AAAAATTTTG GTTGCGTGTG CGGCCAAGAC
GAAGACGACG AGGACGGCGT CCCCGCACAG CTTTAGCCTA GTTCACTTAT CTCTTCTTGC
TATCAACATA TTCTTGTAGC GCCGGCGACG CGTCTCGAAA TTTTTAAACG CTGTCAATCT
TGTCTGACTC CGCACTCTTC GTCCGTTCAT CGAGATCGCG TGCATGGCGT CCATCGACGT
CGGCGTCGCC GCGTTCTCGT GTCGTCCGTC CGCGCGCGCG CGCGAGCGAC GCGCGTGCGA
ACCGTCGTCG TCGACATCGC GTCCGCGCGC GCGCGCCCTC GTCAGCCAAC ACCGACGCGC
GTCGCTCGTA CGCACGCGCG CCGCCGATGG GGCGTCCGCG CTGACATACG TCGCCGACAG
CGTCATTGGT GGTGCGCTAG TGTTCGCGCT CGCGAGGTCA GGGTCGAGGT ACACGTCGAG
GAGAGATTCG GGCTGGTTGG CGACGGAGGA CGACGACGAG GCGGAGGTCG ACGACGCGGG
CATCCGATGG ACGGTCGCGA GCGTGGTCGG GTGCGTACCG CTGTTAGCTT GGCTCGCGTG
GGTGCTACCT GTGATCTCGG TCGGGGAATG GGACGACGAT CAACGTCCGG GGACGATAGC
AAAGCCGGAG GCGTTTGCGC TCGCGGCGGC GTACCTACTC GCGTACGCGG CGCACGGATT
CAACTTATCC GACGGTTTCA CGTGGGCCAT AACGGTGTTG TGTGCGGGAC ATGTGCAGCT
AGAAAGGACA AACGCACTTC TAGCCCCGAG CTCGGACGAT GCTCTCGAGA TCGCCTCGCC
GCCGAAGCGC ACTGAGAAGG AAAACGACAT TGTTCGTGCG TTGCTGAATC CCCGACCGGC
GACGACTATG GAGGAGTGGA CCCGCGACGA AACCACTGGC TCGATCACTC AAGCTCCGCA
AAATTCAGTC GAAGGCGCGG TCAAACTCGG ACGATCACTC GGCAAAGCCG GGGTCGTTGC
GAGACAACTC AGCGAAAGCA TAGCCGAAGG AAAGTTGCAA GCGGAAATCG AACAAGAGAC
GCTCCGTACG GAAGAAGCGG TGCGGCGCCA GAACGAGTTA CTTTCAGGAG AGCTCGAAGA
GTGGGACGGC CGATTCCGAT TACGAACGAT GACGCGAACA GAGCTATTAG AGCTCGCGCG
TCAACGGGGA ATGACCAGGT ATTCAAAATT GAACAAACCG GAGCTCGTCG AGCGCTTAGA
AGCCGAGATC TATGAATAGT AGTAGAACAT GTACACGCTA GTATTACTGT ATCACAACAA
AGAAAAGATG T
 
Protein sequence
MTLEDAIARY EATKAAAIAT ARDAAVRVRE EATRAQRVVM NAPAPALAAR FARADGFVDR 
GAYPVFVERI AVGSVIFSQS YARDAWLHVK NNHLLVALFM AHPKHPFSRT ERAVCLFCSL
IMGFGLTCAF GLIADEPDKT VVSVIVGGFI QGVYDALLRM FAECICIQSC PRCVVNCFET
CGRIGMVLQF LLGILVLCIG FLAFVTSESL RALGGVTWRF AMSKASSWVV ASMIFVLLGH
HLARRNQMRP AASRHTFSEK EAHERWNTPQ EPWCCSCCLP SRAPSYFWNY YIGEDVSFED
LPMKPPNVIG GALVFALARS GSRYTSRRDS GWLATEDDDE AEVDDAGIRW TVASVVGCVP
LLAWLAWVLP VISVGEWDDD QRPGTIAKPE AFALAAAYLL AYAAHGFNLS DGFTWAITVL
CAGHVQLERT NALLAPSSDD ALEIASPPKR TEKENDIVRA LLNPRPATTM EEWTRDETTG
SITQAPQNSV EGAVKLGRSL GKAGVVARQL SESIAEGKLQ AEIEQETLRT EEAVRRQNEL
LSGELEEWDG RFRLRTMTRT ELLELARQRG MTRYSKLNKP ELVERLEAEI YE