| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_118781 |
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| Symbol | CIF2 |
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| ID | 5000999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009357 |
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| Strand | + |
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| Start bp | 346555 |
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| End bp | 349787 |
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| Gene Length | 3233 bp |
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| Protein Length | 1053 aa |
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| Translation table | |
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| GC content | 61% |
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| IMG OID | 640416420 |
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| Product | chloroplast translation initiation factor 2 |
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| Protein accession | XP_001416631 |
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| Protein GI | 145344213 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.106372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCCA TCGCCGTCAG CGACGCGCAC CGCACTTTCG TCCTCCCCCC CCCCGTGGCG
ACGTCATCGA GCGTCACCGA CCCACCGCTC GTCTCCGACG TCGCCTCGTT CTCGTCCTCC
CCCGCCGTCG TCGCGTCGCC TTCGATCGCC CTCGCCTTCG CCTCCCACTT CCCACCCCCG
TCCTCGCTCG GTTTCGCCCC GATGTGCGTC ATCGCGTCTC GTTTCAAATC ATCCCTTCGC
GTCGACGCGT ACCGCATCCT CGTCCGTCGC GCCGTCGTCG CGGTGTGGCC GTCCAGCCGT
CGCCCGTCCG TCCGTCTCGT CCCGTCTCGG GACGCGAATC GCCGGATCGG CGAATCGCCG
GATCGCGCGA TCGGCGGATC GGCGGATCGG CGATCGCGCG ATCGATCGTC CGTCGATCGC
GCGATCGCGT CGATCGATCG ATCGTCGATC GACGTCCGTC GACGGACGTC GATCGTCGAT
CGTCCCGCCC GGCGCGTCGA TCGTCCCGCC CGCACAATGA CGTCGTCCGC GTCGGCGATG
TTTGCGCACG CGACGACGGG CGCGCGCGGC GCGTCGACGG TGCGCGCGCG CGCGAGGACG
TCGGTGACGA CGACGGGCGC GCGCGCGACG ATCGCGCGCG GCGCCGGGGC GCGGCGAAGC
GCGCGCGCGA CGGCCGAGGA CGGGCGCCGC GATGGAGGGT TTCGTCTCGG GACGGCGACG
ACGGACGGAT GGGCGCGAGC GCGCGCGATG CGCGGCGAGG GACGAGAGGA CAGAGCGGTG
ATGACGCGCG CGGTGGCGGA CGCGGAGGCG GCGCGGGAGG ACGACGATAA AAAGTCGCGC
GCGAAGCTCG TGCGAGGGGC GGACGGGAAG TTTTACCGCG AGGGCTCGGA GGGCGGCGGT
CGCGGCGGCC GCGGCGGTCG CGGCGGTCGC GGCGGTGGAC GCGGTGGTGG ACGCGAAGGT
GGACGAGGTG GATTCGGGCG CGGTGCGCGC GGTGGTGCAG GCGGCCGCGG CGATGGGGGT
CAACGAAACT TTAGAAACGC GGCCAAGCCG AGCGGCGGCG GTCGCGCGGG TCGCGGCGGC
CGCGGTGGAC GACAAGACTT TCGATTCCAA GACGGTCGCA AACCGGGACG CGGCGGTAGA
CCAAAGATGA ATATGAGTGG TGCGAGTGGT AGCGATCAAG TGAAACAGCG ACGAGGAAGC
AAAGCGGCAA AGAGCGCGCA GCGCAAAAAG GCGCTCGAGG AAAACAGAGC CGTGGCTGTG
GAGATTCTCG AAGTTCCCAC GGATGGCATG GCGATCGAAG ATCTCACCGA ACTTCTCGCC
ACGACGCAAG CGCAAATTAT CAAAACGCTT TTCATGAAGG GTATCGCGGT TCAAATGGGC
CAGTTGCTCG ATAAGGAAGC TGTGATTGCC GTGGCTGAGG ATATGGAAGT GGAATGGATA
GACGAGGCTG AACAGGGCGT CGCGACGGCG GCAAAGAAGG TGACGCAGTT CTTGAGCGAA
GACGACTTCG ACTACTTGGT ACCGCGAGCA CCCGTAGTTA CCATCATGGG TCACGTCGAT
CACGGTAAAA CATCGCTGTT GGATTACATT CACAAGTCCA AGGTTGCCGC GGGCGAGTCC
GGCGGCATCA CGCAAGGCAT CGGCGCGTAC CAAGTCAGCA CCATGGTTGG TGATGAAGAG
AAGGATATTA CCTTCCTCGA CACTCCGGGT CACGAAGCGT TCAGTGCGAT GCGTGCTCGT
GGTGCGCGAG TGACGGATAT TGCCATAATT ATCGTCGCGG CCGACGACGG CGTTCGACCG
CAAACGGAAG AGGCTGTATC TCACGCCCGA GCCGCCGACG TTCCGATCAT CGTCGCCGTC
AATAAAATTG ACAAAGAAGG CGCGAACGTC GACCGTGTGC GTGATGAACT ATCGCGCATC
GGTATCATCA GCGAAGAGTG GGGCGGGGAC GTTCCGTTCC TGCCCATCAG CGCCAAGTCT
GGCGAAGGTA TCGACGAGTT GCTCGAAACT ATTTCTCTCA CCGCCGAGCT CGCCGAGCTC
GTCGCGAATC CCGATCGCGA AGCTCAAGGT ACGGTCATCG AGGCATTCCT CGACAAACAA
CGTGGTCCGA TGGCGACTGT TCTCGTCCAA GCCGGCACTT TGCGCATCGG CGATGCGATT
CAAATTGGTG GCGCGTATGG CAAAGTGCGC GCAATGGACG ACGCAGATGG CACCAAAGTC
GAAGAGGCTG GACCATCTAT GCCTATTCAA ATCATGGGCC TCAACGGCGT TCCAGCCGCG
GGTGAAGAAT TTACCGTCTA CGCGTCCGAT ACCGCGGCTC GTGACAAGGC TGAGCAAGTC
CAAAATGAGA TTCGCAACAA CCGCTTGATT GAGGGCAACG TTGTTTCGCT GAGCAACTTG
CCGGGCGATG AGGATGGATT ACAAAAGATC AATCTCATCG TCAAAACAGA CGTTAGTGGT
TCTTGCGAAG CAGTCAAGGC TGCTCTCAGT GCGTTGCCTC AAGACCGCGT CCAGCTTCGT
TTCCTCATGG CCTCTGCAGG CGAAGTGAGC GAGAGCGACG TCGATTTGGC TTCTGCCTCC
GAAGGGATCA TCTTGGCTTT CAATACGCCT TGCAGCGACC GAATCGGCGA GATTGCGAAA
AAGAGGAAGG TTGAAGTACG TACTTACGAC GTTATCTACG ATCTGGTCGA TGAAGTTCGT
GCGGCAATGG AAGGCATGTT GAGTTCGATC AAGGAAGAAA TACCGTTTGG CAAGGCGACG
TGTAAGGCTG TCTTTGGCGG CGGTAAGGCG AAGGTTGCCG GTTGCGAGGT GACTGACGGT
TACTTCCAGT CCAAAAAGTA CTTGAGAGTC ACTAGAAGGG GCAAAGAAGT GTTCTTCGGT
AAGGTCGGCT CACTTCGTCG CGTCAAGGAT ATCGTCAAGA AGGTTGAGGC TGGCTTAGAA
TGCGGTATCG GCGCCGATCC CGAGTGGGAC GGCTTCAAAG CGGGCGACGA ACTGGAGTGC
TTGGACTTGG TCGATAAGAT TCAAACACTC GAAACTGCGA GTGAAATTTT GGCAGAACGT
GTTGAAGAAT ACCAAGCTGG TGAGGCCGAG CGTGAAGCCG CGCGAGAAAA GGCCAAGGAA
GGTTACCAGC GACAACAACG ACGGGCCGCT CCGTCAAAGT AGAGTGCATG TGCGACATAG
ATAAAATCAA GTTGAACGAA TGTGTATAAC TAAAACCAAC CATTTTTTAC AAC
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| Protein sequence | MMSIAVSDAH RTFVLPPPVA TSSSVTDPPL VSDVASFSSS PAVVASPSIA LAFASHFPPP
SSLGFAPMCV IASRFKSSLR VDAYRILVRR AVVAVWPSSR RPSVRLVPSR DANRRIGESP
DRAIGGSADR RSRDRSSVDR AIASIDRSSI DVRRRTSIVD RPARRVDRPA RTMTSSASAM
FAHATTGARG ASTVRARART SVTTTGARAT IARGAGARRS ARATAEDGRR DGGFRLGTAT
TDGWARARAM RGEGREDRAV MTRAVADAEA AREDDDKKSR AKLVRGADGK FYREGSEGGG
RGGRGGRGGR GGGRGGGREG GRGGFGRGAR GGAGGRGDGG QRNFRNAAKP SGGGRAGRGG
RGGRQDFRFQ DGRKPGRGGR PKMNMSGASG SDQVKQRRGS KAAKSAQRKK ALEENRAVAV
EILEVPTDGM AIEDLTELLA TTQAQIIKTL FMKGIAVQMG QLLDKEAVIA VAEDMEVEWI
DEAEQGVATA AKKVTQFLSE DDFDYLVPRA PVVTIMGHVD HGKTSLLDYI HKSKVAAGES
GGITQGIGAY QVSTMVGDEE KDITFLDTPG HEAFSAMRAR GARVTDIAII IVAADDGVRP
QTEEAVSHAR AADVPIIVAV NKIDKEGANV DRVRDELSRI GIISEEWGGD VPFLPISAKS
GEGIDELLET ISLTAELAEL VANPDREAQG TVIEAFLDKQ RGPMATVLVQ AGTLRIGDAI
QIGGAYGKVR AMDDADGTKV EEAGPSMPIQ IMGLNGVPAA GEEFTVYASD TAARDKAEQV
QNEIRNNRLI EGNVVSLSNL PGDEDGLQKI NLIVKTDVSG SCEAVKAALS ALPQDRVQLR
FLMASAGEVS ESDVDLASAS EGIILAFNTP CSDRIGEIAK KRKVEVRTYD VIYDLVDEVR
AAMEGMLSSI KEEIPFGKAT CKAVFGGGKA KVAGCEVTDG YFQSKKYLRV TRRGKEVFFG
KVGSLRRVKD IVKKVEAGLE CGIGADPEWD GFKAGDELEC LDLVDKIQTL ETASEILAER
VEEYQAGEAE REAAREKAKE GYQRQQRRAA PSK
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