| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_30197 |
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| Symbol | |
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| ID | 5000189 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009356 |
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| Strand | + |
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| Start bp | 697320 |
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| End bp | 698798 |
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| Gene Length | 1479 bp |
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| Protein Length | 411 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640415610 |
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| Product | predicted protein |
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| Protein accession | XP_001416218 |
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| Protein GI | 145342497 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00425] rRNA pseudouridine synthase, putative
[TIGR00431] tRNA pseudouridine 55 synthase
[TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GACGCTTTCG GCCGTCCAAC CCGGGTCGAA TTGAAAGGAA CGAAACATTC TTTCGATCGA
TCGAACCACG TAAGGAGCGC ATCCAACTAC ATGGGCCAAA CAGAAAAGGT TCGTTGAGTC
GTATTTATAA TTTTCGGCAA TTGAACGCTA AGTAGGACCT GAAAATCGAA CCCGAAAGTG
CCAACCATAC GCTCGATACG TCTGCATGGC CGCTTCTGCT AAAGAATTAT GACAAGTTGA
TGGTACGTAT CAATATTACG TGTTCTTTGC AAGTGTTCTT AGAGGGTATC TGTAGGTACG
AACTGGTCAC TACACTCCAA TTCCGTGTGG AAGCTCTCCA CTGCGACGAC CACTGGCAGA
GTATCTACGT TACGGGGTCA TCAATTTAGA CAAGCCCGCC AATCCTTCTT CGCATGAGGT
AGTTGCATGG TTGAAGCGCA TCCTAAGGGT TGAAAAAACT GGACATAGTG GTACACTCGA
CCCAAAAGTT ACTGGTTCAC TCATTGTCTG CATTGATCGT GCCACGCGCC TGGTAAAGTC
TCAACAGGGT GCAGGCAAGG AGTACGTGTG CGTTTGTCGA TTGCATTCAG CGCCGACAGG
TGGTAAGAGT GCTGTTGAAC GCGGTATTGA AACTCTTACC GGCGCACTTT TTCAACGGCC
ACCGTTAATT TCAGCTGTCA AAAGACAGTT GCGCATTCGA ACTATCTATG ATAGTAAACT
TCATGAGTTT GATGAGGCCA GGAATCTTGT TGTTTTCTGG GTATCATGTG AAGCAGGCAC
TTACGTTCGT ACTTTATGTG TGCATCTTGG ATTACTATTG GGAGTTGGTG GTCACATGCA
AGAGTTACGC CGAGTTCGCT CTGGAATCTG CTCAGAGTCA AAGAACCTCG CGACCATGCA
CGACGTGCTA GATGCTATGT GGGTGTGTGA CAACTTGAAA GATGATCATT ACATTAGACG
CGTTGTTATG CCGCTCGAGG TTTTGTTGAC GAACTACAAG CGGGTTGTTG TGAAGGACTC
CGCCATAAAT GCAATTTGTT ACGGTGCCAA GCTCATGATT CCTGGTTTAT TAAGATATGA
AGCTGGCATC GAGGTTGGGG ATGAGTGCGT TCTGATGACA ACGAAGGGCG AAGCTATCGC
AATCGGCATA GCTGAAATGA CAACTGCTGT TATGGCGACT TGCGACCATG GCAGCGTTGC
TAAGGTCAAG CGAGTGGTAA TGGAAAGAGA CACTTATCCA AGACGTTGGG GTCTGGGTCC
CAACGCGCAG AATAAGAAAC AAACAAGCAC CGATAAATCA CAGAAATTAG GAGCGTCGAT
TATTGCATCC GACGGCGCAA ATACGGGAAA AGAGATGATA AAGGAGAAGA AAGAGAAGAA
AGAGAAGAAA GAGAAGAAAG AGAAGAAGAG AAAGCTGGAC GAATAATTGC TGACAGTTTT
GCAGTTTTTT TGATCCGATC GAGTGTACAA ATCACACTG
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| Protein sequence | MGQTEKDLKI EPESANHTLD TSAWPLLLKN YDKLMVRTGH YTPIPCGSSP LRRPLAEYLR
YGVINLDKPA NPSSHEVVAW LKRILRVEKT GHSGTLDPKV TGSLIVCIDR ATRLVKSQQG
AGKEYVCVCR LHSAPTGGKS AVERGIETLT GALFQRPPLI SAVKRQLRIR TIYDSKLHEF
DEARNLVVFW VSCEAGTYVR TLCVHLGLLL GVGGHMQELR RVRSGICSES KNLATMHDVL
DAMWVCDNLK DDHYIRRVVM PLEVLLTNYK RVVVKDSAIN AICYGAKLMI PGLLRYEAGI
EVGDECVLMT TKGEAIAIGI AEMTTAVMAT CDHGSVAKVK RVVMERDTYP RRWGLGPNAQ
NKKQTSTDKS QKLGASIIAS DGANTGKEMI KEKKEKKEKK EKKEKKRKLD E
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