Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_119626 |
Symbol | Pac1 |
ID | 5000248 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009356 |
Strand | - |
Start bp | 666734 |
End bp | 667735 |
Gene Length | 1002 bp |
Protein Length | 231 aa |
Translation table | |
GC content | 45% |
IMG OID | 640415669 |
Product | Proteasome subunit alpha type 4-like protein |
Protein accession | XP_001416455 |
Protein GI | 145343708 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00724028 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGCA GGTGAGACAG AGGCAACTTT TGTGCGCCTA CAGATACAAT TAACTGCGAT CCTAGATACG ACTCGCGGAC GACAACGTTT AGTCCAGAAG GTCGTCTTTT CCAGGTTCGT CTAGATTTGA CTGATCACAC GTTACCATGT TCACAGATGC ATGACTAGGT GGAGTATGCT CTCGAGTCGG TGAACCATGC TGGAACGTGC ATAGGTCTGC ACACAGAGAA TGGCATATTG CTTGCTTCCG AGAAAAAGAT TATGTCGAAG GTAGATCTTG ATTGCATGAT TTATAGTCTG AAGAGTTGAG CTTGTCTTAT GCAGCTTCTC GAGCAAAGTA GTACGCCAGA AAAACTTTGG AAAATAGACC AGCATATAGT CGCTGCAATC GCTGGACTGA ACGCAGACGC GATGATTCTG ATAAATTTTG CGAGGTAAAT TTGTGTCTAA ATACTGGATT CCTCTTCTAA CCGAGCCTTA AAGAGTGATT GCTGGGCGCT ACAGAGCACG ATATGGGACA TTGATCCCAG TGGAGAATCT TGTGCAAGAA TTGAGCGATC ACAAACAAGG ATACACACAA TTCGGTGGCC TTCGGCCGTA CGGAGTTGCT TTTCTCTTTG CGGGTTGGTA AGCGTTTTCG AGATTTTAAA TCACAACGGC TTAACACAGT GCAGCGACGG GCGGAACGGA TTCCAACTGT ATCATAGTGA GCCATCCGGC AATTACAGTG CTTGGAAGGT ATGCCTAGAT ATTTTACAAG CGTGAACGAC GTCATCTGTT TCTCAGGCAG CAGCTATTGG TGCAAGTCAT CAAGCGGCGC GTTCTATGCT GAAAACCGAT TTTACCGAAG GGCTCAGCAT AGATGAAGCA AAATCCGTCG CTTGCAAAGT ATTACAAAAA ACTATGGACT GTGTCAATTT GACAAGTGAC AAAGTCGAAA TGTTCTACTT AACTCGCAAC AAAGATACAG GCGAAGTGTT TACGCAAACA CTTTCGCTTT GA
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Protein sequence | MARRYDSRTT TFSPEGRLFQ VEYALESVNH AGTCIGLHTE NGILLASEKK IMSKLLEQSS TPEKLWKIDQ HIVAAIAGLN ADAMILINFA RVIAGRYRAR YGTLIPVENL VQELSDHKQG YTQFGGLRPY GVAFLFAGCD GRNGFQLYHS EPSGNYSAWK AAAIGASHQA ARSMLKTDFT EGLSIDEAKS VACKVLQKTM DCVNLTSDKV EMFYLTRNKD TGEVFTQTLS L
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