| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_39526 |
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| Symbol | |
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| ID | 4999868 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009355 |
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| Strand | + |
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| Start bp | 326136 |
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| End bp | 327806 |
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| Gene Length | 1671 bp |
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| Protein Length | 536 aa |
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| Translation table | |
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| GC content | 64% |
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| IMG OID | 640415289 |
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| Product | predicted protein |
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| Protein accession | XP_001415457 |
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| Protein GI | 145340698 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.612078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGCG CGTTCGCCCG CGTCGTCCTC GCGCGCGCGC TCGCCGCCGC GCGCGCCCCC
GTCGCGCACG CCGCGCGTCG TCTCGCCGTC GCGCGTCCGC CCTGCGCCGC GAAATCCACC
GCCGCCGCCG CCGCGTCCGA CCGCGGCGAC GTTCGCGTCG GCGACGAAGT CTCCGTGGAG
TGCGTCGATT TCGCCACGTC GGGCGAGGGC GTGTGCAAGC TCGCGAATGG GATGGTTTTG
CTCTGCGACG GCGCGACGCC CGGAGAGGTG GTGCGCGCGC GGGTGACGAA GCTGCGGAAG
AAGCTGGCGC ACGGCGCGAA GACGGCGACG GAACGCGCGG CGCCGAACGC GGTGACGGCG
CCGTGCCCGC ACCACGAACA GTGCGGAGGG TGCGCGTGGC AGCACGTGAA TTACGACGCG
CAGGTGGGGC ATAAGCGGAA TCGGGTGGTG GACGTGCTGG CGAGAATATA TAAAGCGGGC
GAGGACGCCG AGGCGAAAGT CGGCGCGTGC GTCGGCGCGG ACGAGACGTC GAGGTATAGG
AATAAAATGG AGTTCGCGTT CGCGAGTGGA ACGAGAGGAA AGACGGTCGT CGGGTTGCGA
CCGCGAGGGG CGAACGATTC GGTGGTGGAT TTAAGCGGTG GATGTCTGTT GCAGAGCGAG
GAGGCGGATC GCGTGTTGGC GGCGATTCGG GAGACGCTGG AACGCGCGGA CGGGCGCTTG
GAGGCGTTCG ATCGCACGAG CGGCGAAGGC ACCCTTAGAA GCGTGACGAT TCGCACGGCT
GGTGGCGAGC GCGGCGGTGA GAAGGCTGTG ATGGTCGATT TAGCGACGAC GGCTTCGCCG
AACGAACTGA AAACGGGACC GCTCGCGGGA CTCATCGACG TCGTCTCGAA GGTACCGGGC
GTGGTGTCCG TGGTGCACAC TTCCGTGCCG AGCGAAGCCG AACTCCGACG CGCGGGCGGT
GGACGCTCGT CAAAGTTCGT CAAGGGTGGC ACGACGACGA AGGCTGGGTC AACTAAGAAA
GTCGAGGCGG TGTTCGGCGA GAACAAATTA GTCGAAACGC TCAACGGCAT CGACTTTGAA
CTTTCTTCGG CGTCCTTCTT TCAGACCAAC ACTGAGCAGG CTGCGAGATT GGTGCGACAG
GTTCGCGAGG CGTGCGCTTT CAGCGGCGAT AAGTCTGAGA TCGTGCTCGA CCTGTTTTGC
GGTGTCGGTA CGATGGGACT CAGCGTCGCG AGCGACTGCT CGCGAGTGAT GGGATGGGAA
GTCGTTCCAG AGGCGGTGAA AGACGCGAAA CGCAACGCCG AGCTGAACAA CATCACGAAC
GCCAAATTCT ATCGCGTTGA TTTGGCGAGA TTAAATCCGT CCAAAGGCCC GAAAGGTCTT
CTCACGACGC CGAAAGGCAA AGAGCTTCCC ATGCCGGACA TCGTCATCAC GGACCCGGCG
AGGCCTGGTA TGGACTCCGC ACTCATCGCG ATCCTGCGCA CAATCGGTGC TCGGCGTATC
GTCTACGTGT CGTGTAATCC CGCGACGCAA GCGCGAGACT TGCTACTTCT CACGGCGCCG
TCGGAGGGCG CGGACGACGT CGCGTACGAG CTCAAAACCG TCACGCCCGT CGATATGTTT
CCTCACACGA CGCACGTCGA GTCCGTCGCC GTGCTCGAAC GCAAAGCTTA G
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| Protein sequence | MPRAFARVVL ARALAAARAP VAHAARRLAV ARPPCAAKST AAAAASDRGD VRVGDEVSVE
CVDFATSGEG VCKLANGMVL LCDGATPGEV VRARVTKLRK KLAHGAKTAT ERAAPNAVTA
PCPHHEQCGG CAWQHVNYDA QVGHKRNRVV DVLARIYKAG EDAEAKVGAC VGADETSRYR
NKMEFAFASG TRGKTVVGLR PRGANDSVVD LSGGCLLQSE EADRVLAAIR ETLERADGRL
EAFDRTSGEG TLRSVTIRTA GGERGGEKAV MVDLATTASP NELKTGPLAG LIDVVSKVPG
VVSVVHTSGG TTTKAGSTKK VEAVFGENKL VETLNGIDFE LSSASFFQTN TEQAARLVRQ
VREACAFSGD KSEIVLDLFC GVGTMGLSVA SDCSRVMGWE VVPEAVKDAK RNAELNNITN
AKFYRVDLAR LNPSKGPKGL LTTPKGKELP MPDIVITDPA RPGMDSALIA ILRTIGARRI
VYVSCNPATQ ARDLLLLTAP SEGADDVAYE LKTVTPVDMF PHTTHVESVA VLERKA
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