Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_29265 |
Symbol | |
ID | 4999749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009355 |
Strand | + |
Start bp | 1100976 |
End bp | 1101686 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | |
GC content | 58% |
IMG OID | 640415170 |
Product | predicted protein |
Protein accession | XP_001415690 |
Protein GI | 145341178 |
COG category | [A] RNA processing and modification |
COG ID | [COG5178] U5 snRNP spliceosome subunit |
TIGRFAM ID | [TIGR02167] bacterial surface protein 26-residue repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACAAC TGTTCAAGGA TAAGCAGTCG TTCAACGTCG ATATCTCGGC GTGGAACGTG GGTCAGGTGA CGGATATGTT TAACATGTTT TCGAACGCGA TCTCGTTCAA TCAAAACATC GGGGGTTGGG ACGTGTCCTC GGTGACGCAG ATGTATCAAA TGTTTCACAA CGCCACAGTA TTCAACCAAG ACATCAGCGG TTGGACCGTC GCCCAGGTGC AGGACATGGC ATACATGTTC TCCGAAGCCA AGGCGTTCGA CAAGGACATC ACCAGTTGGA GTAATTATAC TGGATCCGGT TCCCCCGTTT ACGTGCAGAT GTTTGTTGGC GCCACGGCGT GGAACGCGGC GTGGGGTCGA CCCGGCGGCT TGCAGAACTT CGACGGACCA GCGAGCGTGT GGGCGGTCGA CGGCACGTAC ACTCCACCGC CACCACCACC GAGCCCACCA CCGCCGAGTC CGCCGCCACC ACCGAGCCCA CCGCCGCCGA GCCCGCCGCC GGCGGACGTG CCCACGTACG GCATAGGCAT CATGATGGGC GGCGGTCTGC TGTGCGTATT TTTCGGCTAC AAGTACTACC GACGACGTCA AAAAGCGCGC GCGCCCGCCG TGAGCATCAA AGATCGCATG GATGAGGACG AAGAAGCCAT GACTAAGTCG ACGGTGGAAT TCTTCGACAA GTTGGACAGC GGCCGCATCA AGTCGCCGTA A
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Protein sequence | MRQLFKDKQS FNVDISAWNV GQVTDMFNMF SNAISFNQNI GGWDVSSVTQ MYQMFHNATV FNQDISGWTV AQVQDMAYMF SEAKAFDKDI TSWSNYTGSG SPVYVQMFVG ATAWNAAWGR PGGLQNFDGP ASVWAVDGTY TPPPPPPSPP PPSPPPPPSP PPPSPPPADV PTYGIGIMMG GGLLCVFFGY KYYRRRQKAR APAVSIKDRM DEDEEAMTKS TVEFFDKLDS GRIKSP
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