Gene OSTLU_29265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_29265 
Symbol 
ID4999749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009355 
Strand
Start bp1100976 
End bp1101686 
Gene Length711 bp 
Protein Length236 aa 
Translation table 
GC content58% 
IMG OID640415170 
Productpredicted protein 
Protein accessionXP_001415690 
Protein GI145341178 
COG category[A] RNA processing and modification 
COG ID[COG5178] U5 snRNP spliceosome subunit 
TIGRFAM ID[TIGR02167] bacterial surface protein 26-residue repeat 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAAC TGTTCAAGGA TAAGCAGTCG TTCAACGTCG ATATCTCGGC GTGGAACGTG 
GGTCAGGTGA CGGATATGTT TAACATGTTT TCGAACGCGA TCTCGTTCAA TCAAAACATC
GGGGGTTGGG ACGTGTCCTC GGTGACGCAG ATGTATCAAA TGTTTCACAA CGCCACAGTA
TTCAACCAAG ACATCAGCGG TTGGACCGTC GCCCAGGTGC AGGACATGGC ATACATGTTC
TCCGAAGCCA AGGCGTTCGA CAAGGACATC ACCAGTTGGA GTAATTATAC TGGATCCGGT
TCCCCCGTTT ACGTGCAGAT GTTTGTTGGC GCCACGGCGT GGAACGCGGC GTGGGGTCGA
CCCGGCGGCT TGCAGAACTT CGACGGACCA GCGAGCGTGT GGGCGGTCGA CGGCACGTAC
ACTCCACCGC CACCACCACC GAGCCCACCA CCGCCGAGTC CGCCGCCACC ACCGAGCCCA
CCGCCGCCGA GCCCGCCGCC GGCGGACGTG CCCACGTACG GCATAGGCAT CATGATGGGC
GGCGGTCTGC TGTGCGTATT TTTCGGCTAC AAGTACTACC GACGACGTCA AAAAGCGCGC
GCGCCCGCCG TGAGCATCAA AGATCGCATG GATGAGGACG AAGAAGCCAT GACTAAGTCG
ACGGTGGAAT TCTTCGACAA GTTGGACAGC GGCCGCATCA AGTCGCCGTA A
 
Protein sequence
MRQLFKDKQS FNVDISAWNV GQVTDMFNMF SNAISFNQNI GGWDVSSVTQ MYQMFHNATV 
FNQDISGWTV AQVQDMAYMF SEAKAFDKDI TSWSNYTGSG SPVYVQMFVG ATAWNAAWGR
PGGLQNFDGP ASVWAVDGTY TPPPPPPSPP PPSPPPPPSP PPPSPPPADV PTYGIGIMMG
GGLLCVFFGY KYYRRRQKAR APAVSIKDRM DEDEEAMTKS TVEFFDKLDS GRIKSP