Gene OSTLU_23838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_23838 
SymbolRPL3 
ID4999434 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009355 
Strand
Start bp81993 
End bp83598 
Gene Length1606 bp 
Protein Length386 aa 
Translation table 
GC content58% 
IMG OID640414855 
ProductRibosomal protein L3, component of cytosolic 80S ribosome and 60S large subunit 
Protein accessionXP_001415385 
Protein GI145340549 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGCGAGAGAA GAGTACGTCA CGACCGCCGA CGCGCGCGCG CGAACGCAAT CGAACCATTC 
GCGTCGCCTC GCGCGCGCTC GTGAAGCGAC GCGTGGCGCG ACCGACGCAC CGACCGCCGC
GACGCACCGG GCCAAACCCC GAGCGCGCCG CGATCGCGCA TCGCGCGTGA AACCTCTCGC
GCGAGCGCGA GCGCGCGAAC AAGAGACTGA CGATCGACGC GCGCGTTTCG TTTTCATCAT
TCACAGTGTC TCATCGCAAG TTTGAACGTA CGTGGCGACG CGAGGCGCGG CACGATGATC
TCGGGACGCG ATCGCGCAAA GCCCTAGCGG CGAAGGTGAC CTCGCGCGAC TCGACTCGGT
GATGCGACGC GAACGATGAC TGACGAAGAC GTGTTGTGTG TGAAATATAG ACCCGCGTTA
CGGTAACCTC GGTTTCTTGC CGAAGAAGCG CTCGAAGCGC AGCCGGGGTA AGGTCAAGTC
GTTCCCGAAG GATGACGCGA GCAAGCCGCC GCACCTCACC GCGTTCATGG GCTTCAAGGC
TGGCATGACG CACATCGTTC GCGATGTCGA TAAGCCCGGC TCGAAGATGC ACAAGAAGGA
AACGTGCGAA TCGGTGACGA TCATCGAGTG CCCGGAACTC ATCGTGGTTG GCCTCGTCGG
TTACGTGCGC ACGCCGAAGG GCTTGCGCGG GAAGAAGACG GTGTGGGCCG AACACTTGAA
CGATGAAGTC CGCCGTCGAT TCTACAAGAA CTGGTTCAAG TCCAAGAAGA AGGCGTTCAC
CAAGTACACG AAGAACTACA CCAACGGTTC CATCGACAAG GACTTGGACG AGCTCAAGAA
GTCTTGCGAC GTCATTCGCG TCATCGCGCA CACGCAAGTG CGCAAGGTTT CAGGCTTGAA
GCAAAAGAAG GCTCACATTA TGGAGATTCA AGTTAACGGT GGTGACGTCG CCGCCAAGGT
TGACTTTGGC TACGCTCTCT TCGAAAAGGC TGTGCCGGTC GACACCGTGT TCCAGCAAGA
CGAAATGATT GATCTCATCG GCGTCACGAA GGGTAAGGGT TACGAAGGCG TCGTCACCCG
TTGGGGCGTC ACCCGACTTC CGCGCAAGAC CCACAGAGGT TTGCGTAAGG TTGGTTGCAT
CGGTGCGTGG CACCCGTCGC GTGTTTCCTA CACGGTTGCC CGTGCGGGTC AACACGGTTA
CCATCACCGT ACGGAAATCA ACAAGAAGGT GTACAAGATC GGCAAGGCTG GTCAAGACAG
CTTCGGTGCG AGTACGTTCC ACGACCCGAC GGAGAAGGAA ATCACCCCGA TGGGTGGCTT
CGCGCACTAC GGTATCGTCA AGCACGACTA CGTCATGATC AAGGGTGGTG TCGTCGGCCC
GCGCAAGCGC TTGATCACGA TGCGTCAATC TCTCTTCAAG CAAACGCGTC GCGTCGCCAC
GGAGAAGATT ACGCTCAAGT TCATCGACAC CTCGTCCAAG TTCGGTCACG GTCGCTTCCA
AACCTCCGAA GAGAAGGCGA AGGTTTTCGG TACGACGAAG CAAGCGTAAG CTTCTTTGTC
GTTCGCAATC GCTGGTTAGT CACGTTTGTT TTAATGTCGA AGACGC
 
Protein sequence
MSHRKFEHPR YGNLGFLPKK RSKRSRGKVK SFPKDDASKP PHLTAFMGFK AGMTHIVRDV 
DKPGSKMHKK ETCESVTIIE CPELIVVGLV GYVRTPKGLR GKKTVWAEHL NDEVRRRFYK
NWFKSKKKAF TKYTKNYTNG SIDKDLDELK KSCDVIRVIA HTQVRKVSGL KQKKAHIMEI
QVNGGDVAAK VDFGYALFEK AVPVDTVFQQ DEMIDLIGVT KGKGYEGVVT RWGVTRLPRK
THRGLRKVGC IGAWHPSRVS YTVARAGQHG YHHRTEINKK VYKIGKAGQD SFGASTFHDP
TEKEITPMGG FAHYGIVKHD YVMIKGGVVG PRKRLITMRQ SLFKQTRRVA TEKITLKFID
TSSKFGHGRF QTSEEKAKVF GTTKQA