Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_13808 |
Symbol | |
ID | 4999557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009355 |
Strand | + |
Start bp | 586733 |
End bp | 591760 |
Gene Length | 5028 bp |
Protein Length | 1675 aa |
Translation table | |
GC content | 55% |
IMG OID | 640414978 |
Product | predicted protein |
Protein accession | XP_001415544 |
Protein GI | 145340877 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0947447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTCCAC GGGCGCGGCA TTTCCGTTTC AAGCGCCGCG CACGAGCCGT GCGATGCGCG CTCGTCGCGC TCTGCGCCGC CCTCGCCGGC GCGGTCGTCA CCGCGACGTT CGATGTGCTC GGATGTCACG ATAACGGCGT CGTCGGCACG ATCGTCGGCG CGGGCGTCGA AGGAATGCGT GACGGACGGT TTGAAAAGAG TTTTCTGCGC GCGCCCGCCG GCGCGGCGTG CAACGCGACG GTGTGCTACG TCACAGAGAG TGGGAATAAC GCGGTGAAAA CCATCAATAT AGCGAAGAGT GAGATGGTGA TGTATGCGGG ATCGACGGCG GGCACGGCGG GGTCGACGGA CGGAAAGGCG AAGGCGTGCG CGGAGAAAGG CGAGACGCAG GCGTTGTTTA AACAGCCGGC GAGCGTCGTG CTCGTGTCGC AGTCGAGCTC GTATTACGCG GCGGGAGATG TGCTGGTGGT GGATAGCGGT AATAACGCCA TCAGGCGAGT GTCGGGGGAT GACGTGAGCA CGTTGATCAC GGGACTGGCA TTTGCACCGA CGGCGATGGT ATTCGACGAG AGCGACGGGG CGATTTATTT TCTAGGATCG TCGCAGAATC ATGTGTCCAA GATAGCGTAC GGGTCTGGGA CGGTGTCAAC GTACGCGGGC AGTCAAGGGA CGTCGGGACT CGTCGACAAC GTCACTCCCT CGAGCGCACG CTTCAACGCT CCTGAAGGCT TGGCGCTGGA TGGCGCGAAT CGCATATTAT ACGTAGCAGA CACCGGAAAC CACGCCGTTA GGGCGATCGA CTTATCCACC GGAGCGGTAA CGACAGTACT GGGCGATGGG ACGATTTCTG CAAGCGGTGC GGTACTCGAT TCTGACGGTA TACTTTCCAC CCCAGCACGC TTCAACTACC CGGCGGGGAT CGCGTATAAC CTCGATTCCA GCCTCAGCAG CGGTGTTCTA TTAGTCACGG ATCGGGGAAC GCATCAGATT CGTAAAATAA TTCTCACGGA TGCAACAGCA TCGAATGCTG CGACGGTGGT GACGGTGGCC GGAAGCTACA CCGGAACCTC TGGTTTCCGA GACAGTACCG TGGGAAGCGC GGCGTTGCTA AACAAGCCGG TGTCCATTTC ATACGTCAGC GGTTCAACAT ACGTGGTTGT CGACCAAGAC AATCACGCAA TTAGAAAAGT CAGTTTAGAG GCACCGGTAC AGATCACGTT CACGATGCAA TCGGTGGCGG ATATCGAGAA GACGGAACAA AGTCATGATT TGGTGATAGA GGAGTACGGC TCGTATTCTG TCAACGGACC TCCGTACAAT GAGACTACGC ACTTCTCGGG TGTTTTGACG TATTTTGGCG AGATACACGA GCTCGTCATG TGCGCTTATC CATCGGTTGA ATACTTTGTG AAATTCGAAG GCGCCATGCA AGCCACGGTC AAGGATGCGA GTTATTTGTA CTTCGGGTAC ACGGGCGCGA CGGTGGATAA CAGCTTGGCA CGCACCTTTC GGATTCGTGG ACCGGGATGC ACGGACGCTT CGGCGCCTAA TTATAATCCG TTCGCCACGA GTGATGACGG TTCGTGCGTG AGTGGGGTAC AACTTCGCTT CACCGTCGGA GCGTACGGCG TCATAGATCA TGCTGTTTAC GAATTCGAAG GACCAGGATT TTACATCTCA GACTCTTTCG AAAGCGGAAG TGGGGAAGCT CATTACGAAC AATCGATAGA TTTCGACTTC ATGGCATATC CAGGAGCGGT GTACATTGCA ACTTTTTACG GTGCACTGAA TGCTTCGTTA ACCACCGTGT CCGGCCAGTC GGGCTTGGGA GCGACGTTGA TCACATACTG GACCTACACG TCGAGTCAAG CCAGCGACCA GAGTGTGCAG CGAGCTCGGG TCATTGGGCC AGGGTGCATC GACCCATCGT ATCCATCGTA TGATCAGTAT GCTTTGGCCT CGGACGAAGT GAATGCATGT ACCTTTGCGA GCACCATGCG CGTCGTTCTC AACGCCAGCG CGTCGGCAGA GTCGTGGTAC GATTTTGGCT CCATCGTAGG CACCTCGGAC CAAGTCGCTT CGGTCGATGG GATCTCATTG GACAACGCTA CGGATCAATT TGTTTTGGAT ATGTCGGTAA CTCCCGGCGT GTACGAGTTT GAATCGTACG GAGATGTTTC GGGGGCAATT CAACAATATG ACTCTGGTTC TTACACGAAC CTTCGCACTT GGCTCGGCAC TGATAGTTCA CTCAGAACCG ATTCATACGG ATTTTCAACC ACAACAGACT CAGAACGTAT CACAGTCTCG TTCCCGTTCA CGTTTTCACT GAATATCGGC GCGAACGGTG TGGTGGGATA TGCTGGTGGT GTACTCGTTG GCGATGACGG TACGTCAAGC GTGACCTTCG TCGAAGGTTC GGTTCCGGCG CTAGCCACCA TTACATCGAC GTTTACACAA GTCGCATCGT CGACCTCGAT AAAGAATTCT TTATGGTACA CGTCGAACAC TAATATTCTT GGCGTGTCAA CGTACGTCAT GGCACTCACG CCCACTGGAT ACCAGCTAGC CGTCTCTGCT GCGCTTTCGC TAAAGTATGA CAAAACTGGA GTGCCGTCGC AAGAAGGTAA CGAAAATATA GTCCTTTTCA AGGCTTCAGA CAGCACAATG CAAGATGCTA TCACTTTGTA TGGTGCTACT TTCGACGCCG CAAACGGCAT CGCCTCGGCA ACGATTGATT CCATGGGTAC TTACGGCGTC GCGTTTAGAG CAACGGTGAG AAGTATCTCG CCGCCGCGTG GCTGGCTCGA CGGAGACGTC ACGGTGACGT TGGATGGTGT CGACTTTTCG TCGCTGAGTA CCGTAAATAC GGTAACAACG TATCAAAAGT GTCGATGGGG TGAGACCTTC ACAGTCGCAA CCACTGTAGC TTCGAGTGAT ACTCGATCAC AGCTTTCAGG CTCGGACAGC ACCATCCTGG GTACGAAGAT AAATGCCGTG TCCTGCCAGT CACCGGTGGT GGCATACGCT GGATTTACTA TCGTAGAGTT CCATGACTCA CGGAATGGCA TGTCGAGTGA CACCAGATTT GTTTACTTAC AAACCGCATC TCCACAAGTT CGAGCTGTCG TCCCGCCAGA AGGCGTCTCG TCTGGTGGAA CCGTCGTCTC GTTATCCGGT TCATTTCTCA GAGCTGGCGC CGTGGCGTCT GATTGGGAAA AATACGATCT AGACACCACA TTCTTCGCAA ATAGCGGACC AACCACAGTA TCTTGCGTCT TTGGCTCAAC AACGTCGAGT GGCATCGCCG TGTCTTCTGC GTTCGCTCGA TGTGAGAGTC CGCCGTCGAC CACGACTGCG TCGAAGACGT TGCGTGTTGG TGATTTATCC CATCAAGTGG CTGGATATGG CGTCTACACG TACGTTACTG ATTTCGATGC CGGCATCACA ACGTCAGCGT ATGAAGATCA TAGCGGAGAC AGCTCGTTTA CCGATGGTGG AGTCGTGGTG GACTTGTACG CTGCGACAGG ATCTCTCACA AAACAGCGCA ACTCCTTCTA CGACTGGAGG TGCTTGTTTG GCACCGTCAG CGTGGCGGCG AGACGCAAAC CTTACGGCGA CTTGAGCTGT GTTTCTACAT CGATAGCTAG AGGAACAACT GTGGACGTGC GACTGGTGGG TCCTCTCGGG GAACACTCTC TTTTGCTCGG TAACATCACC GCCGCTACGA TTGCGAGTAC GTACGTCGAC TCGATTGTAA CTCTTCCAGG AACTCCAAAG ATAGTGGAAA CGATCACTAT CATCGAGAGA GCGATATCTC CGCCAGTCTG GGAGCCTCTG AAGTGGGTTA GCACCGCTCA CGCACTCGTT GCGACACCAG GCGGAAGTTG GTCTGGTACA AGTCAAGGAT ACGGCCATGG TACGTATGGC GTCGCAAATT GTACCTTCAC CACGGATGCG GGCGTCGTCA CGACGAGGGT AGCGAACATC ATATCGTCTG CGCTCGTGGT ATGCGAGGCG CCTATCACTG CGGCGGAAGA ATGGTATTCA CTTACTATTA CGAGCAACGG TGTATCATCT GGATCCCCAA GGACGTCGCT CAAGGCTTGG TACGAACCTG TGACTCGATC GGGGAGCTAC TCGCTCGGCG ACGTCGTCGA CGCGTGGCTG CCTTCGGCAA CCGCCGGCGG AGTCGTTATT CGACCGTATT TCTTACCCTC AAGCGCCTCA TCAGTTTCTA CGCTGTGTTA TTTCGGCGTT TCTATAGATC CAGTGGCGTA CTCATCCAGC GTGTGCACCG TTCCCAGGTC GCTCTCTCCA GGCTTCGTCG CCATCACTTT GGGCGTCGCC TCGGTCGGAC CAAGTTTTGC GCATCAGATC GAGATTCTTG AGCCCGTGCA CGCGAGCATG GTTTTACCGA GATTCGTCGA CGCTAACGGT GGATCGATCG TGGACATTAT GGGTAGAGAT TTATACTCCG GACCTGGCGC GATGCTCATA TACTGTGCGT ACAAGGATTC TTCAACGATA ATCGAAGCCG TCTTCGTCTC GTCGGGGCTG TTGAAGTGCG AGACGGGGCT CAGCAGCAAC ACCATCTACC GCGATCAGAA AGATTTGGGA ATCGGTCGAT ACGGTGACTT CTACGGTACC GAGCCGATCG AACTTTCGTT GTCACCGGGA AAGGGTACTA TAGCTCTTGC AGCGAACGTG TTCGGCTTGC AAACTCTGCT GACGCCCACG GTGACGGCGG TTTCCCCCGT CGCGTCGTCG GCGCAAGGCG GCGCCATCTT CGCCGTGACT GGTACACAAT TCGCCTCGCA AACTGGCTAT GCGAATTGCG TCTTTGGCAA CGTCTTCGTG GCGGCCATGG TCTACAACTC CACGTACGCC GATTGCGTGG TGCCATCGCT GTATCCGATG CGAACGTACG ACGTCTCCTT CGCCGTGACG GGTTCGGCCG GGCAGCGCGA GTTGGACGTA GGATTCGCCT ACGCCAACGG CACCGCGCTC GCATTCAGCG CATACTAG
|
Protein sequence | MSPRARHFRF KRRARAVRCA LVALCAALAG AVVTATFDVL GCHDNGVVGT IVGAGVEGMR DGRFEKSFLR APAGAACNAT VCYVTESGNN AVKTINIAKS EMVMYAGSTA GTAGSTDGKA KACAEKGETQ ALFKQPASVV LVSQSSSYYA AGDVLVVDSG NNAIRRVSGD DVSTLITGLA FAPTAMVFDE SDGAIYFLGS SQNHVSKIAY GSGTVSTYAG SQGTSGLVDN VTPSSARFNA PEGLALDGAN RILYVADTGN HAVRAIDLST GAVTTVLGDG TISASGAVLD SDGILSTPAR FNYPAGIAYN LDSSLSSGVL LVTDRGTHQI RKIILTDATA SNAATVVTVA GSYTGTSGFR DSTVGSAALL NKPVSISYVS GSTYVVVDQD NHAIRKVSLE APVQITFTMQ SVADIEKTEQ SHDLVIEEYG SYSVNGPPYN ETTHFSGVLT YFGEIHELVM CAYPSVEYFV KFEGAMQATV KDASYLYFGY TGATVDNSLA RTFRIRGPGC TDASAPNYNP FATSDDGSCV SGVQLRFTVG AYGVIDHAVY EFEGPGFYIS DSFESGSGEA HYEQSIDFDF MAYPGAVYIA TFYGALNASL TTVSGQSGLG ATLITYWTYT SSQASDQSVQ RARVIGPGCI DPSYPSYDQY ALASDEVNAC TFASTMRVVL NASASAESWY DFGSIVGTSD QVASVDGISL DNATDQFVLD MSVTPGVYEF ESYGDVSGAI QQYDSGSYTN LRTWLGTDSS LRTDSYGFST TTDSERITVS FPFTFSLNIG ANGVVGYAGG VLVGDDGTSS VTFVEGSVPA LATITSTFTQ VASSTSIKNS LWYTSNTNIL GVSTYVMALT PTGYQLAVSA ALSLKYDKTG VPSQEGNENI VLFKASDSTM QDAITLYGAT FDAANGIASA TIDSMGTYGV AFRATVRSIS PPRGWLDGDV TVTLDGVDFS SLSTVNTVTT YQKCRWGETF TVATTVASSD TRSQLSGSDS TILGTKINAV SCQSPVVAYA GFTIVEFHDS RNGMSSDTRF VYLQTASPQV RAVVPPEGVS SGGTVVSLSG SFLRAGAVAS DWEKYDLDTT FFANSGPTTV SCVFGSTTSS GIAVSSAFAR CESPPSTTTA SKTLRVGDLS HQVAGYGVYT YVTDFDAGIT TSAYEDHSGD SSFTDGGVVV DLYAATGSLT KQRNSFYDWR CLFGTVSVAA RRKPYGDLSC VSTSIARGTT VDVRLVGPLG EHSLLLGNIT AATIASTYVD SIVTLPGTPK IVETITIIER AISPPVWEPL KWVSTAHALV ATPGGSWSGT SQGYGHGTYG VANCTFTTDA GVVTTRVANI ISSALVVCEA PITAAEEWYS LTITSNGVSS GSPRTSLKAW YEPVTRSGSY SLGDVVDAWL PSATAGGVVI RPYFLPSSAS SVSTLCYFGV SIDPVAYSSS VCTVPRSLSP GFVAITLGVA SVGPSFAHQI EILEPVHASM VLPRFVDANG GSIVDIMGRD LYSGPGAMLI YCAYKDSSTI IEAVFVSSGL LKCETGLSSN TIYRDQKDLG IGRYGDFYGT EPIELSLSPG KGTIALAANV FGLQTLLTPT VTAVSPVASS AQGGAIFAVT GTQFASQTGY ANCVFGNVFV AAMVYNSTYA DCVVPSLYPM RTYDVSFAVT GSAGQRELDV GFAYANGTAL AFSAY
|
| |