Gene Mflv_5534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5534 
Symbol 
ID4976925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009339 
Strand
Start bp279421 
End bp280683 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content67% 
IMG OID640459760 
ProductNLP/P60 protein 
Protein accessionYP_001136783 
Protein GI145226129 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCC AAACCGCAAT CGACGCCTAC CTGCGGGACG CCCGCGAACT ACTAGGCACC 
GGAGCCACGC CGGGCAACTC CCGGCGCCCG CGCACTGACA TGCGCCCGGC CCAACCCCAA
TCCTGGATCG GGTCAGCCGC CGACTCTGCT GGCGCCACCG CCGACCGCCT CGACAACGAC
CGGGGAAAGC TCGGTAGCGC CCACGACCGA GCTACCCAAG CCCTCGACGC GGCAGCCGGC
ATCGCTCGCG ACGCACACAG CGGAATGACG ACCATTGAGA ACGCCTGGCA CAGCGACAAA
CTTGCCCTCG GACCGATCTC CAACACTCCC CAGGGCCAGG CCGCTCTCCT CCAAGCCGGG
ATGCAGCGTG TGTCCGAAAC GCAGTCCTTG GTCTTCGGCG TCACCACCCG CTTCGGAGAC
CTCGCCACCA ATGTCGGCGA CGCCATCACC GAACTACCGA CCCCGCTCGA CGCAGAAACC
TCCACACCCT CCAAAGACAC CCCAGCCGAC ACCGACGAAG ACTCGGGAGC CGACGAAGAC
AGCAGCCAGA CCGCGCAGAC CGAAGAATTC AACGCGCTGG GCGGCCCACT TGAAGACGAA
CCCACTACAT TCCCGTCATC AGCGACCGAT GCCGCCCCGA TCACCACGTC CGCCGGACTC
GGATCCGGAT CGCCCATGGA ATCGCTGCTC AGCAGCATGG GTTCCGGCGG CATGCCTTCG
ATGGGCCAGC TCCCCCTCAG TGGTGGAGTG CCCGGCGGCG GCGCCGCCGG ACTGTCCTCG
CTGCTGCAGC CACTCATCGA CGCCGCCGGA TCCACCGACA GCACATCAGA GAGCGACGAC
AGCGCCGAAG ACGACAACCA CGCCGGCGTC GCGTGGAACG GCACCGAGGC CCAAAAGGCG
ATCAAGACCG CCGAACAAGC GCTGGGACTG CCCTACGTGT GGGGAGGTGG CGGCGCCGCC
GGCCCATCCG GCGGCGGCTT CGATTGCAGC GGCCTGACCC AATGGGCGTT CGCCCAGGCC
ACTGACGGCC GCATCATCCT GCCTCGCACC ACCTACGACC AGATCAACAT GGGACAGAAC
ATCGCCCCCG CCAACATCCG CCCCGGCGAC CTCGTGTTCA GCAACTTCTC CGCCCCTGGC
GTGCCCGAGC ACGTCTCGCT CTACGTCGGC GACGGCAAGA TCATCGAAGC CCAGCAGACC
GGCGTCCCCG TCAAGTACTC CACGGCGCCC ACGGACGATA TCGTCGTCAG ACGCGTCCTA
TAA
 
Protein sequence
MSIQTAIDAY LRDARELLGT GATPGNSRRP RTDMRPAQPQ SWIGSAADSA GATADRLDND 
RGKLGSAHDR ATQALDAAAG IARDAHSGMT TIENAWHSDK LALGPISNTP QGQAALLQAG
MQRVSETQSL VFGVTTRFGD LATNVGDAIT ELPTPLDAET STPSKDTPAD TDEDSGADED
SSQTAQTEEF NALGGPLEDE PTTFPSSATD AAPITTSAGL GSGSPMESLL SSMGSGGMPS
MGQLPLSGGV PGGGAAGLSS LLQPLIDAAG STDSTSESDD SAEDDNHAGV AWNGTEAQKA
IKTAEQALGL PYVWGGGGAA GPSGGGFDCS GLTQWAFAQA TDGRIILPRT TYDQINMGQN
IAPANIRPGD LVFSNFSAPG VPEHVSLYVG DGKIIEAQQT GVPVKYSTAP TDDIVVRRVL