Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_5477 |
Symbol | |
ID | 4976868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009339 |
Strand | - |
Start bp | 218672 |
End bp | 219922 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640459703 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001136726 |
Protein GI | 145226072 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.461601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGACGG GGCGGCGGTT TCGGGTCGAG TTCACCGACG AACAAGCCGA CTACGCTGAG CGGATCGGCG CGGCGTGCCG GGCGGTGTGG AACACCGGGT TGGAGCAGCG CCGGGAGTAT CGCCGCCGTG GGGCGTGGAT GAACTACCAG CCCCAGGCCA AGGAGCTGGC CGAAGCCAAG ACCGAGCATC TCTGGTTGAA AGATGTTCCC GGGCATTGCT TGCAGCAGAC GTTGATGGAT CTGGACCGGG CGTGCCGTGA GCATGGCACG TGGAAGGTGC GGTGGCGATC GGGGCGTCGG TGGGCGCCGT CGTTCCGGTT CCCCGAGGGC AACAAGATGG CCGTGGAGAA GCTCAACCGC CGCCACTCCC GGATCAAGTT ACCCAAGCTG GGCTGGGTGA AGTTCCGCGC CAGTCGCAGC CTCGACGGTG AGACTATCCG TTCGGCCACC CTCGCACGAG AGGGCCGGCA TTGGTTCGTC TCGGTGCTTG TCGACGACGG TCGCCAGACC CCCGAGGCCC ACGCGTCACC GGGCAGCGCG GTGGGGGTGG ACCGCGGTGT CGCGGCGGCG ATCGCGACCA GCGATGGTGC CCTGATCGAC CAGGCGTTCG TGACCGTTGG GGAGCGCCGC CGGGCGGTGG CGTTGCAGCG CAAGCTGTCG CGGTGTGCGA AACGCTCGAC CAACCGCGAC AAGACCCGCG CCGCGTTAGC GGCGGTGCGG GCCCGCGAGC GCCGGCGGCG CCTGGACTTC GCCGCTCAGA CCGCCCACCA GATCGCGGCC GCCAACGCTG TGGTCGTCCT CGAAGACCTC AAGACCAAAC AGATGACGAA ATCAGCGAAA GGAACCATCG ACCAACCCGG GCGCAACGTG GCTGCCAAGT CCGGGCTCAA CCGCGCCATC CTGTCCAAGG GGTGGCATCA GTTCGCGTTG GTCCTGTCCT CGGCGGCCCG CTACACCGGG ACCAACGTCG TGAAGGTGCC GGCGGCCTAC ACGTCGCAAC GCTGCTCAGC GTGTGGGCAT GTGGACCCGA AATCCCGTGA GAGCCAAGCG GTATTCCGGT GCACCCACTG CCCGCATACC GAGCACGCGG ATGTGAATGC CGCCAAGAAC GTTCTGGCCG CAGGGCGTGC GGTCACCGCC TGTGAAGACC AACCGAGGCC CGCGGGCCGA GCGCGGTCGC TGAACCAGGA ACCAGCAGGA AACCGCGAGG AATTACTGCG CCAACCCACC ACTGCTGCAC CCGCAGCATG A
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Protein sequence | MLTGRRFRVE FTDEQADYAE RIGAACRAVW NTGLEQRREY RRRGAWMNYQ PQAKELAEAK TEHLWLKDVP GHCLQQTLMD LDRACREHGT WKVRWRSGRR WAPSFRFPEG NKMAVEKLNR RHSRIKLPKL GWVKFRASRS LDGETIRSAT LAREGRHWFV SVLVDDGRQT PEAHASPGSA VGVDRGVAAA IATSDGALID QAFVTVGERR RAVALQRKLS RCAKRSTNRD KTRAALAAVR ARERRRRLDF AAQTAHQIAA ANAVVVLEDL KTKQMTKSAK GTIDQPGRNV AAKSGLNRAI LSKGWHQFAL VLSSAARYTG TNVVKVPAAY TSQRCSACGH VDPKSRESQA VFRCTHCPHT EHADVNAAKN VLAAGRAVTA CEDQPRPAGR ARSLNQEPAG NREELLRQPT TAAPAA
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