Gene Mflv_5263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5263 
Symbol 
ID4976572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp5609011 
End bp5610648 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content72% 
IMG OID640459492 
Product2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 
Protein accessionYP_001136515 
Protein GI145225837 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 
TIGRFAM ID[TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.444181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAATC CCTCGACGGC GCAGGCCCGC GTGGTCGTCG ACGAACTCGT CCGCGGCGGC 
GTGCGCGACG TGGTGCTGTG CCCCGGGTCG CGCAACGCGC CGCTGGCCTT CGCGCTGCAC
GACGCCGACC GCGCCGGACG GCTGCGCCTG CACGTGCGCA TCGACGAGCG CACGGCGGGC
TTCCTCGCGA TCGGTCTCGC GGTCGCCGAG CGGGCGCCGG TCTGCGTGGC GATGACGTCG
GGCACCGCGG TCGCCAACCT CGGCCCCGCG GTGGTGGAGG CCAACTACGC GCGCGTGCCG
TTGATCGTGC TGACCGCCAA CCGCCCCTAC GAGCTGCTGG GGACCGGCGC CAACCAGACT
TTCGAGCAGC TCGGCTATTT CGGCACCCAG GTGCGGGAGA GCATCAGCCT CGGCCTGGCC
GGGGATCACG CCGACATGGG CTCGCTGAAC GCGCAGTGGC GCTCGGCGAC GTGCCGGGTT
CTGGTGGCCG CCAAGGGTTC TCGTTCGGCC AACGCCGGGC CGGTGCAGTT CGACATCCCG
CTGCGGGAGC CGCTGGTGCC CGACGCCGAC GACGGTTCGG CGTATGCGCC CGAGGGACGT
CCCGGCGGCA AGGAGTGGAC GTACACGCCG GCGGTGACGT TCGATCAGCC GCTGGAGATC
GACCTCACCC CCGACACCGT GGTCATCGCC GGCCACGGCG CCGGGGTGCA TCCGAACCTC
GCGCACCTGC CGACGGTCGC CGAGCCGACC GCCCCCTACG CCCAGACGCC GTTGCATCCG
TTGGCGCTCA GCCTGATTCG GCCCCGTCAG GTCATCATGC TGGGCCGGCC CACGCTGCAC
CGGTCGGTGT CGACGCTGCT CGCCGATCCG GCGGTCCCGG TGTTCGCGCT GACGACGGGT
CCGCGCTGGC CCGACGTGTC GGGCAACTCG CAGGCGACCG GCACCAGGGC CGTCACCTCC
GGTGCCGCGT CGCCGGAGTG GTTGCGTCGC TGCGCGGAGG TGAACCGGCA CGCCGTGGAG
GCGGTCCGCG GCCAGCTCGC GGCGCATCCG CTGACGACCG GTCTGCATGT CGCGGCGGTC
GTCGCCGACG CGGTGGGCCC CGGTGACCAG TTGGTGCTGG GGGCGTCGAA TCCGGTGCGC
GACATCGCCC TGGTCGGCTT CAACACCGCG GATGTCAAGG TCCGGTCCAA CCGTGGGGTC
GCCGGCATCG ACGGGACGGT GTCGACGGCC ATCGGCGCCG CGCTGGCCCA CGAGCGCGCC
ACCGGCGGTC GCACGGTCGC GCTGATCGGG GACCTGACGT TCGTGCACGA CAGCTCGGGG
CTGCTGGTGG GGCCGACGGA GCCGACGCCG CGCAAGCTCA CCATCGTGGT GTCCAACGAC
AACGGCGGCG GAATCTTCGA GCTGCTCGAG CAGGGCGACC CGCGGTTCTC CGATGTGTCG
TCACGGATTT TCGGCACCCC GCACGACGTC GACGTCGGAG CGCTGTGCCG GGCCTATCAC
GTCGAGAGCA CGCAGATCGA GGCCGGCGAG CTCGCGGCGG CCCTCGCCGA GGATTTCGAC
GGTATGCGGG TGCTGGAGGT CAAGGCCGAC CGGTCGTCGC TGCGGGCGCT GCACGCGTCG
ATCAAGGCCG GCCTGTGA
 
Protein sequence
MVNPSTAQAR VVVDELVRGG VRDVVLCPGS RNAPLAFALH DADRAGRLRL HVRIDERTAG 
FLAIGLAVAE RAPVCVAMTS GTAVANLGPA VVEANYARVP LIVLTANRPY ELLGTGANQT
FEQLGYFGTQ VRESISLGLA GDHADMGSLN AQWRSATCRV LVAAKGSRSA NAGPVQFDIP
LREPLVPDAD DGSAYAPEGR PGGKEWTYTP AVTFDQPLEI DLTPDTVVIA GHGAGVHPNL
AHLPTVAEPT APYAQTPLHP LALSLIRPRQ VIMLGRPTLH RSVSTLLADP AVPVFALTTG
PRWPDVSGNS QATGTRAVTS GAASPEWLRR CAEVNRHAVE AVRGQLAAHP LTTGLHVAAV
VADAVGPGDQ LVLGASNPVR DIALVGFNTA DVKVRSNRGV AGIDGTVSTA IGAALAHERA
TGGRTVALIG DLTFVHDSSG LLVGPTEPTP RKLTIVVSND NGGGIFELLE QGDPRFSDVS
SRIFGTPHDV DVGALCRAYH VESTQIEAGE LAAALAEDFD GMRVLEVKAD RSSLRALHAS
IKAGL