| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5187 |
|---|
| Symbol | |
|---|
| ID | 4976498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 5529500 |
|---|
| End bp | 5531230 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640459417 |
|---|
| Product | VanW family protein |
|---|
| Protein accession | YP_001136441 |
|---|
| Protein GI | 145225763 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCG ACCGAGCGCA ACCAAAGGTC ATCACGGCGA CCGCACCCGC CGGGCCGGCA
CGTCCCCGTC GCCGGCGGCT TCTGTGGACC CTGATCGCCG CGCCGTTCGC GCTGCTGGCC
GTCGCCTACA TCGGTGATCT GCTGTACAGC AAGGACCGGG TCGTCCGGGG CGTTACCGCC
GCCGGCGTCC CGATCGGCGG GCTCACCCTG ACCGACGCCG AGGACCGCTT GCGCGCTGAG
GTCAGCCCGC GCGCGACGCG TCCGATCCCC GTCACCGCCG GCCCGGCCCG GGACGAGATC
GATCCGGCAT CAGCCGGTCT GACCGTGGAC TGGCGCGCGA CCGTCGAACA ATCCGGCGCC
CAACCCGTGA ACCCGATCAC CCGGCTCACG TCACTGTTCG AGACCCGCGA GATCGGCGTC
GTCTCCACCG CCGCCGACGA CGCGCTCACC GCCGCCCTCG ACAGACTCGA CGAGACCATC
GCGAAGGATC CGGTCGAAGG AACCGTGCGT TTCGACGGGC GCGAACCCGT CGCGGTCGAC
CCGGAGAACG GACTCCGCCT CGACGTCGAC ACCTCCGCAG ACCTGCTCAA ACGTGACTGG
GCCACCGGCC GCACCATCGA CCTGCCGATC GTCGAACCCG AGCCCGCCAC AACGGCGTCC
GACGTCCAGG AGGCCATCGA CGACGTCGCC GCCCCGGCGG TCTCGGCACC GCTGGTCATC
ACCGGCGACG ACGACACCCG CGCGACCGTC GACGAGGACG TCATCGCCGC GGCCATGACC
TTCGACGTCG AGGACGGCGA CATCCTGGCC ACCGTCGACG AGAACGTCAT CGTCGACGCC
GCACGGCCCC AGCTCGCCGA CTCCGAGACA CCGCGGCGCG ACGCCACCCT CGACTTCGCC
GCGTCCCCGC CGGCGAAGGT GCCGTCCGAA GACGGCCGTC GCATCGACTA CGACGAGACC
CTCACCGACG TCATGGATGC GCTCACCAGC ACCGACGACC GCGAGATCGC GGCGGTCTAC
GTCGACGACG CGGCGACGTT CACCACCGAG GACATCGAGA AGCTCGGCCC TGTCGAGGTC
ATCGGCGAGT TCCAGACCTC CGGATTCTCC GGCGCCTCCG GGCGCAACAT CAAACGTGCC
GCCGAGGCGA TCGACGGCAT CGTCGTCGCG CCGGGGGAGA CCTTCAGCCT CAACGGCGCC
ACCAACCCGC GCACCGCGGC CAACGGATAC GTCGAGTCCG GCATCATCCT CAACGGCCGC
CCGGACACCG GCGTCGGCGG CGGGGTGTCC CAGGTCGCCA CCACCCTGTT CAACGCCGCG
TACTTCGCGG GCATGGATCT CGTCGAGCAC CAGGAGCACA GCTACTACAT CAGCCGCTAT
CCGGCAGGCC GCGAGGCCAC CGTGTTCGGC GACGAGATCG ACGTGAAATT CCGCAACGAC
GGGCCGACGC CGGTGCAGAT CCAGACCACA TGGACGTCGT CGGCGATCAC CGTGCAGCTG
GTGGGGATCA AACGCTACGA GGTGTCCTCG GCACAGAGTC CCCGCTCGAA GCCGACCAGC
CCCCGCACCA TCACGATCCC CGCCGGTGAA TCCTGCAGCG CCAGCGGCGG CGCGCCCGGT
TTCACCATCA CCGACACCCG CACGCTGCGC GACATCGTCA CCGGGGACAT CCGCACCGAA
TCCCACACCG TGCGCTACGA CCCGATCCCC AAGGTGGTGT GCGGGGGCTG A
|
|---|
| Protein sequence | MRADRAQPKV ITATAPAGPA RPRRRRLLWT LIAAPFALLA VAYIGDLLYS KDRVVRGVTA
AGVPIGGLTL TDAEDRLRAE VSPRATRPIP VTAGPARDEI DPASAGLTVD WRATVEQSGA
QPVNPITRLT SLFETREIGV VSTAADDALT AALDRLDETI AKDPVEGTVR FDGREPVAVD
PENGLRLDVD TSADLLKRDW ATGRTIDLPI VEPEPATTAS DVQEAIDDVA APAVSAPLVI
TGDDDTRATV DEDVIAAAMT FDVEDGDILA TVDENVIVDA ARPQLADSET PRRDATLDFA
ASPPAKVPSE DGRRIDYDET LTDVMDALTS TDDREIAAVY VDDAATFTTE DIEKLGPVEV
IGEFQTSGFS GASGRNIKRA AEAIDGIVVA PGETFSLNGA TNPRTAANGY VESGIILNGR
PDTGVGGGVS QVATTLFNAA YFAGMDLVEH QEHSYYISRY PAGREATVFG DEIDVKFRND
GPTPVQIQTT WTSSAITVQL VGIKRYEVSS AQSPRSKPTS PRTITIPAGE SCSASGGAPG
FTITDTRTLR DIVTGDIRTE SHTVRYDPIP KVVCGG
|
|---|
| |