Gene Mflv_5032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5032 
SymbolrplF 
ID4976343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp5354158 
End bp5354697 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID640459259 
Product50S ribosomal protein L6 
Protein accessionYP_001136286 
Protein GI145225608 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.33726e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.564685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCA TTGGAAAGCA GCCGGTCCCG GTTCCTGCCG GGGTCGATGT GACGATCTCC 
GGACAGAACG TGTCCGTCAA GGGTCCCAAG GGGACGCTGA CGCTCGATGT CGCTGAGCCC
ATTGAGGTTT CGCGCAACGA CGACGGCGCC ATCGTGGTCA CCCGCCCCAA CGACGAGCGG
CGCAACCGCT CGCTGCACGG GTTGTCCCGC ACGCTGATCG CCAACCTGGT GACCGGGGTG
ACCGAGGGCT ACACCACCAA GATGGAGATC TTCGGTGTCG GCTACCGCGT CGTCGCCAAG
GGCAGCAACC TCGAGTTCGC GCTCGGGTAC AGCCACCCGG TGCTGATCAA CGCCCCCGAA
GGTGTCACCT TCGCGGTCGA GACGCCCACC AAGTTCTCGA TCTCCGGTAT CGACAAGCAG
GCGGTCGGCC AGATCGCGGC GAACATCCGC CGTCTCCGTA AGAGCGATCC CTACAAGGGC
AAGGGAATCC GCTACGAGGG CGAGCAGATC CGTCGCAAGG TCGGAAAGAC GGGTAAGTAG
 
Protein sequence
MSRIGKQPVP VPAGVDVTIS GQNVSVKGPK GTLTLDVAEP IEVSRNDDGA IVVTRPNDER 
RNRSLHGLSR TLIANLVTGV TEGYTTKMEI FGVGYRVVAK GSNLEFALGY SHPVLINAPE
GVTFAVETPT KFSISGIDKQ AVGQIAANIR RLRKSDPYKG KGIRYEGEQI RRKVGKTGK