Gene Mflv_4979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4979 
Symbol 
ID4976290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp5299050 
End bp5300321 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content69% 
IMG OID640459206 
Producthypothetical protein 
Protein accessionYP_001136233 
Protein GI145225555 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.581997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGGGT ACTGGCTCGA CCTTGCGCTG GTCGCTGTTC TCGTCCTCGT CAACGGGTTG 
CTGTCGGGCA GTGAGGCGGC ATTCATATCC CTGGGGGAGG GACAGCTGCG GGAGATGGAA
CGCCGGGGGA CCCGACGCGA CCGCATCGTG GTGGATCTCG CGCGGGAGCC GAACCGCTTT
CTGGCGACCA TTCAACTCGG GATCACGCTG GCGGGCTTCC TCGCGTCGGC CACCGCGGCG
GTGTCGCTCG CCGAACCCGT GGAATCCCGA CTGCAGTTTC TCGGCGGCGC CGCGGCAGCG
GTGAGCATCG CCGCGGTGAC GATAGTCGTC ACCGCCTCGA CACTGGTCTT CGGCGAACTC
GCGCCCAAAC GCCTGGGCAT GCAGTACGCG CGGCGGTGGG CCGGGTTGGT GGCGCCGCTG
CTGAGATTCC TGGCGATCGT CACGAAACCC GTCATCTGGG GTCTCGGGCA GTCGACCGAC
ATCGCCGTGA GGGTTGTGGG CGGCGATCCC GACGTGGGCA AGAAGGAACC CACCTTCGGC
GAGCTGCGGG AGTTGATCGC CGGCCACAGC GGACTGAACC CCGAGCAGCG CACCATCATC
TCCGGAGCGC TCGAGATTCA CGAGCGCGCA CTGCGCGAGA TCGTCGTGCC GAGGCCCCGG
GTGTTCCGCT TGCGTGCGGA TCTGCCTGTG CCACAGGCAC TTCATGCACT GGCGGCATCG
GGGCACACCC GGGCACCCGT CGTACCGGCC GGAGAGCTGG ATGACGCCAT CGGCGTCGTG
CACCTGCGTG ATCTGCTGGG TTCCGCGGGG ACCGTCGCCG ATGTCGCGCG TCCGGCGCTG
CTGCTGCCCG ACAGCCTGCG GGTCACGGCT GCGCTGAGCC GGCTGATGGA CGAGCACGAG
CAGTTCGCCC TGGTCATCGG GGAACGCGGG GGCGTCTCCG GCATAGTGGC CCTGGAGGAC
CTGCTCGAAG AGGTCGTCGG CGAGATCTAC GACGAGCAGG ACAAGGACAT CCGCGCGGCG
CGGCTGCTCC CCGACGGCAG CCGAATCCTG CCGGGCTCGT TCCCGGTTCA CGACCTCGGC
GATGTCGGTG TCGACGGGTC GCGCCTGCCG CGCGGGAACC ACACCACGGT CGCGGGTCTG
ATCCTGGACA GCCTCGGACG CATGCCCGAG GGACCGGGGG ACCGTATCGA GATCGGCGGC
TACCGATGGG AGGTGACGGC GGTGGACGCA CACGCCATCA CCGAGGTGCG GGTCGTGCCG
TCACCGCACT AG
 
Protein sequence
MDGYWLDLAL VAVLVLVNGL LSGSEAAFIS LGEGQLREME RRGTRRDRIV VDLAREPNRF 
LATIQLGITL AGFLASATAA VSLAEPVESR LQFLGGAAAA VSIAAVTIVV TASTLVFGEL
APKRLGMQYA RRWAGLVAPL LRFLAIVTKP VIWGLGQSTD IAVRVVGGDP DVGKKEPTFG
ELRELIAGHS GLNPEQRTII SGALEIHERA LREIVVPRPR VFRLRADLPV PQALHALAAS
GHTRAPVVPA GELDDAIGVV HLRDLLGSAG TVADVARPAL LLPDSLRVTA ALSRLMDEHE
QFALVIGERG GVSGIVALED LLEEVVGEIY DEQDKDIRAA RLLPDGSRIL PGSFPVHDLG
DVGVDGSRLP RGNHTTVAGL ILDSLGRMPE GPGDRIEIGG YRWEVTAVDA HAITEVRVVP
SPH