| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4867 |
|---|
| Symbol | |
|---|
| ID | 4976178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 5185143 |
|---|
| End bp | 5186759 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640459094 |
|---|
| Product | AMP-binding domain protein |
|---|
| Protein accession | YP_001136121 |
|---|
| Protein GI | 145225443 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.223701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.186874 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCT CCTACGACGC CGGCCCGACC GATGTCGCGA TCCTCGAAGA GACGATCGGC
GCGAACTTCG CGCGCATCGC CCGGACCCAT CCCGGGCGCG ATGCACTCGT CGACGTCGCG
GGCGGACGCC GCTGGACCTA CGCCGAACTC GATGCCGAGA TCGACACTGT CGCCAGGGGT
CTGATGGCGA TCGGTGTCGA GCGCGGCGAC CGGGTCGGTA TCTGGGCCCC GAACTGCCCC
GAGTGGGTGA TCGTGCAGTA CGCGACCGCG AAGATCGGCG CGATCCTGGT GAACATCAAC
CCCGCCTACC GCACCCACGA GTTGCGCTAC GTGCTCGAGC AGTCCGGGGT GGCGACGCTG
ATCTCGGCCA CACAGTTCAA GACCTCGGAT TACGTCGCGA TGGTCGACGA GGTGCGACCG
GATGTTCCTG CGCTGCAACG TGTGTTGTTC ATCGGCACCG CCGACTGGGA CACCCTGCGA
GCCGCCGGGT CCGGTGTGGA CGACGCCGAC CTGCGACGGC GCAGCGGCGC ACTGTCCAAC
CGCGACCCGA TCAACATCCA GTACACCTCG GGCACAACGG GTTTCCCCAA GGGCGCGACG
CTGTCGCACC GCAACATCCT CAACAACGGC TTCTTCGTCA CCGAGCAGAT CCGCCTGCAG
CCCGGGGACC GGTTGTGCAT TCCGGTGCCG TTCTATCACT GCTTCGGCAT GGTGATGGGG
AATCTGGGCT GCACGACCCA TGGCGCGACG ATCGTCATCC CCGCGCCGGC ATTCGATCCC
GGCCTGACCC TGCGTGCGAT CGAAACCGAA AGGTGCACGG CCGTTTACGG CGTGCCCACG
ATGTTCATCG CCATGCAGAA CCACCCCGAC TTCGCCGAAC GCGACCTGTC GACCCTGCGC
ACCGGGATCA TGGCGGGTGC CGTGTGCCCG GTCGAGGTCA TGAAGCGCTG CGTCGAGGAG
ATGCACCTGA CCGAGATGTC CATCGCGTAC GGGATGACCG AGACCTCCCC GGTGTCCTGC
CAGACCCTCA TCGACGACGA CCTGGAGCGC CGCACGTCGA CGATCGGCCG CGTCCACCCT
CACGTCGAGA TCAAGATCGT CGACCCGGAG ACCGGCGAGA TCGTCGAGCG GGGAACACCC
GGCGAATTCT GCACGCGCGG CTACTCGGTG ATGCTGGGCT ACTGGCGCGA GGACGAGAAG
ACCGCCCAGG CGATCGATGC CGACGGCTGG ATGCACACCG GGGATCTGGC GGTGATGCGC
CCCGACGGCT ACTGCAACAT CGTCGGCCGA ATCAAGGACG TCGTGATCCG CGGCGGCGAG
AACATCTACC CCCGCGAGAT CGAGGAGTTC CTCTACACCC ATCCCGACGT CGAGGACGCG
CACGTGATCG GGGTTCCCGA CGATCGCTAC GGCGAAGAGG TCTGCGCCTG GATCCGGATG
CGCCCCGGAC GGACCGCACT CGACGCCGCG GCGGTGCGGG AGTTCGCGAC GGACAAGCTC
GCCCACTACA AGATCCCCCG CTACGTGCAT GTCGTCGACG AGTTCCCGAT GACGGTGACG
GGCAAGATCC GCAAGGTCGA GATGCGGGAG GTCAGCGCCC GGCTTCTCGG GTTGTGA
|
|---|
| Protein sequence | MTGSYDAGPT DVAILEETIG ANFARIARTH PGRDALVDVA GGRRWTYAEL DAEIDTVARG
LMAIGVERGD RVGIWAPNCP EWVIVQYATA KIGAILVNIN PAYRTHELRY VLEQSGVATL
ISATQFKTSD YVAMVDEVRP DVPALQRVLF IGTADWDTLR AAGSGVDDAD LRRRSGALSN
RDPINIQYTS GTTGFPKGAT LSHRNILNNG FFVTEQIRLQ PGDRLCIPVP FYHCFGMVMG
NLGCTTHGAT IVIPAPAFDP GLTLRAIETE RCTAVYGVPT MFIAMQNHPD FAERDLSTLR
TGIMAGAVCP VEVMKRCVEE MHLTEMSIAY GMTETSPVSC QTLIDDDLER RTSTIGRVHP
HVEIKIVDPE TGEIVERGTP GEFCTRGYSV MLGYWREDEK TAQAIDADGW MHTGDLAVMR
PDGYCNIVGR IKDVVIRGGE NIYPREIEEF LYTHPDVEDA HVIGVPDDRY GEEVCAWIRM
RPGRTALDAA AVREFATDKL AHYKIPRYVH VVDEFPMTVT GKIRKVEMRE VSARLLGL
|
|---|
| |