| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4702 |
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| Symbol | |
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| ID | 4976014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | - |
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| Start bp | 5008149 |
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| End bp | 5009900 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640458931 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001135958 |
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| Protein GI | 145225280 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.911193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0031512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCTGGCA TTTCTGAACA CGAGGCACGT GCTCACGCAG ACACATCGGC CCGTTCCGGC
ACCTCGACGG AGGAACCGGC ACTGCACCCG GTGCTCGACC GTCCGCTCGA CGAGGACAGG
ATCACCAGAT CCCGCGGTAT CGACTGGGTC GTGTTCGGGG TCACCGCCGT GTTCGCCGTG
GGCTTCCTGG TGTGGGGGTT CCTGAGCACC GAATCGCTGG CCACCGCCTC CGGTAGCGCA
CTGACATGGG TGATGAACAA CACCGGTTGG TTGTTCGTGC TGACCAGCAC CGGGTTCGTC
GTCTTCGTCC TCTATCTCGC GCTCGGTAGG TACGGCGCCA TCCCGCTGGG CCGCGACGAC
GAGACCCCCG AGTTCAACGG GGTGTCGTGG GTGGCGATGA TGTTCAGCGC GGGCATGGGC
ATCGGCCTGA TGTTCTTCGG TGTCGCCGAA CCGCTCTCGC ACTTCACCAC CCCGCCGCCG
GGCACCGGTG CCGAAGGCGG TTCCGAAGCC GTGCAGAACG CCATGGCCAC CACGTTGTTC
CACTGGACCC TGCACCCGTG GGCAATCTAC GCCGTCGTCG GTCTGGCGAT CGCCTACGGC
GTCTACCGCA AGGGCCGTCT CCAGCTGATC AGCTCGGCGT TCGAACCGCT GCTGGGATCA
CGGGCCAACG GCTCCTGGGG CAAGGTCATC GACATGCTGG CGATCTTCGC CACGCTGTTC
GGATCGGCAG CCTCACTGGG CCTGGGTGCG TTGCAGATTC GCAGCGGACT GCAGATCGTC
GCGGGTATCG GCGAGACCGG CAACGCGATC CTGGTCGTGA TCATCTCGGT GCTCACCGTG
TGCTTCGTGC TCTCCGCCGT CTCGGGTGTG GCGCGCGGCA TCCAGTGGCT GTCGAACATC
AACATGGTGC TGGCCATCTC GCTGGCGTTC TTCGTGTTCG TCGTCGGCCC AACGGTTTTC
ATCCTCAACC TGCTGCCGAC CGCACTGGGC AGCTATTTCG CCGACCTGAA CATGATGTCG
GCGCGCACCG CCGCCGAGGG TTCCGACGTC AACGAGTGGT TGCAGTCGTG GACGATCTTC
TACTGGGCGT GGTGGGTGTC GTGGACGCCG TTCGTCGGCA TGTTCATCGC CCGAATCTCG
CGGGGCCGCA CCATCCGTCA GTTCGTCGGC GGCGTCCTGC TGGTTCCCAG CCTGGTCTCG
CTGGTGTGGT TCGCGGTGTT CGGCGGCGCG GCGATCAACG TGCAGCAGAG CGGAACCGAT
CTCGCGGGCG AAGGCGGCGT CGAGGCGCAG TTGTTCTCGC TGCTCGACCA GTATCCGATC
GCGACGATCG CGAGTGTGGT CGTGATGGTG CTCGTCGCGA TCTTCTTCGT GTCGGGGGCC
GACGCCGCGT CGGTGGTGAT GGGATCGCTG TCGCAGAAGG GCACCATCCA CCCGAGTCGC
GGCACCGTGG TGTTCTGGGG TGTGGCCACC GGAGCGGTCG CCGCGGTGAT GCTGCTGGTC
GGCGGCGAGG ACGCGCTCAC CGGTCTGCAG ACCATCACGA TCATCGCGGC GCTGCCGTTC
GTGCTGGTGA TGATCGGCTT GGCCGTGTCG CTGGTGAAGG ACCTGCGCAC CGACCCGATG
GTGGTACGTC GCAAGTATGC GAACGAAGCC GTCGAGAGCG CGGTGATCTC CGGCGTCACC
CAGCACGGCG ACGACTTCAT CATCTCGGTG GAGAAGGACC CGCACTGTGA CGGCGGGAAA
CCCGGTGGCT GA
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| Protein sequence | MAGISEHEAR AHADTSARSG TSTEEPALHP VLDRPLDEDR ITRSRGIDWV VFGVTAVFAV
GFLVWGFLST ESLATASGSA LTWVMNNTGW LFVLTSTGFV VFVLYLALGR YGAIPLGRDD
ETPEFNGVSW VAMMFSAGMG IGLMFFGVAE PLSHFTTPPP GTGAEGGSEA VQNAMATTLF
HWTLHPWAIY AVVGLAIAYG VYRKGRLQLI SSAFEPLLGS RANGSWGKVI DMLAIFATLF
GSAASLGLGA LQIRSGLQIV AGIGETGNAI LVVIISVLTV CFVLSAVSGV ARGIQWLSNI
NMVLAISLAF FVFVVGPTVF ILNLLPTALG SYFADLNMMS ARTAAEGSDV NEWLQSWTIF
YWAWWVSWTP FVGMFIARIS RGRTIRQFVG GVLLVPSLVS LVWFAVFGGA AINVQQSGTD
LAGEGGVEAQ LFSLLDQYPI ATIASVVVMV LVAIFFVSGA DAASVVMGSL SQKGTIHPSR
GTVVFWGVAT GAVAAVMLLV GGEDALTGLQ TITIIAALPF VLVMIGLAVS LVKDLRTDPM
VVRRKYANEA VESAVISGVT QHGDDFIISV EKDPHCDGGK PGG
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