Gene Mflv_4135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4135 
SymbolxerC 
ID4975449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4387158 
End bp4388060 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content71% 
IMG OID640458361 
Productsite-specific tyrosine recombinase XerC 
Protein accessionYP_001135393 
Protein GI145224715 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.383086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGG TGCTCGAGGA GTTCGATCGG TACCTGGAGC TGGAACGCGG CCGGTCGGAG 
CACACCCGGC GCGCCTACCT GGGCGATCTG CGGTCGCTGT TCGCCTTTCT CGACGAGCGC
AGTCCCGGCA CCGGGCTGGG CGGCCTGACG CTACCGATGC TCAGGTCGTG GCTGGCAGCC
CATGCTGCGG CGGGCACCGC CCGGTCGACG CTGGCACGCC GCACCTCCTC GGTGAAGACG
TTCACTGCAT GGGCGGTGCG CCGCGGCCTG ATCGGTGACG ATCCCGCGAG CCGGCTCCAG
GTGCCGAAAG CGCGGCGTAC CCTTCCGTCC GTCCTGCGTC AGGACCAGGC GCGCGATGCG
CTGGAGGCAG CGGAATCCGG TGCGCAGCAA GGTGATCCAC TCGCAGTGCG CGATCGTCTG
GTGGTCGAGA TGCTCTACGC CACCGGCATC CGTGTCAGCG AGCTGTGCGG GCTCGACGTC
GACGACGTCG ACACTTCGCG CCGGCTGCTG AGGGTGCTCG GCAAGGGCAA CAAACAGCGG
ACGGTCCCGT ACGGCGAACC GGCCCACGCG GCGCTGACGG CCTGGCTGCA CGAAGGCCGG
CCGGCGCTGG CCACCGCGGA TTCCGGTCCC GCGCTGCTGC TCGGTGCGCG CGGGAAACGA
CTCGACCCGA GGCAGGCCCG CACCGTCGTC CATCAGACGG TGTCCGCCGT GGGCGGCGCA
CCCGACATCG GTCCCCACGG TCTGCGGCAC AGCGCCGCGA CGCATCTGCT CGAAGGCGGG
GCCGACCTGC GCGTCGTGCA GGAACTGCTG GGCCATTCCA GCCTCGCCAC CACCCAGCTC
TACACGCACG TCACCGTCGC GCGGTTACGC GCCGTGCACG ACCAGGCCCA CCCCCGGGCG
TAG
 
Protein sequence
MDTVLEEFDR YLELERGRSE HTRRAYLGDL RSLFAFLDER SPGTGLGGLT LPMLRSWLAA 
HAAAGTARST LARRTSSVKT FTAWAVRRGL IGDDPASRLQ VPKARRTLPS VLRQDQARDA
LEAAESGAQQ GDPLAVRDRL VVEMLYATGI RVSELCGLDV DDVDTSRRLL RVLGKGNKQR
TVPYGEPAHA ALTAWLHEGR PALATADSGP ALLLGARGKR LDPRQARTVV HQTVSAVGGA
PDIGPHGLRH SAATHLLEGG ADLRVVQELL GHSSLATTQL YTHVTVARLR AVHDQAHPRA