Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_3872 |
Symbol | |
ID | 4975188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 4137723 |
End bp | 4138535 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640458096 |
Product | FliA/WhiG family RNA polymerase sigma factor |
Protein accession | YP_001135132 |
Protein GI | 145224454 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.103123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTGAGC CCCGCCGCGA GTACAGCGAC GTGCCGAACA TGATCCGCGC ACTGCGTCAG CTGGATCCGG CATCGCCGGA GTACCGCCGC CTGCACGAGC GCATCATCGC GATGACGCTG CCGTTGGCGC AGCACACCGC GCGGCGTTTT CGCGGCCGCG GTCAGTCCCA CGACGACCTC TTCCAGGTCG CCAGCGTGGG CCTGGTCAAC GCCGTCAAGC GGTTCGACCC GGACAGCGGT TCGGATTTCC TCGCCTATGC CGTACCGACG ATCATGGGCG AGGTGCGGCG CTACTTCCGC GACTGCAGCT GGGCGGTGAA GGTTCCGCGC CGGCTCAAGG ATCTGAACAG CCAATTGGCA AAGGCGCGTG CGGAGTTGAC CCAGCAGCTG GGCCGTGCCC CGACCCCGAG CGAGGTCGCA GCGCACCTGG GCATCGACCG GGAAGAAGTC GTGCAGGCGA CGATCGCGAG CAGCAACTAC GCGACGCTGT CCACCGACAG CACGTCCGGC CCCGACGGCG ACTTCGTTGC GCTGCGGGAA ACCCTGGGAG AGCCGGACGC ACGGCTCGAC GCCGTGGTGG ACAACGAGAC CATCCGCCCG CTGATCGAGA AGCTGCCGCC GCGCGAGCAG GCGGTCCTGA AGCTGCGCTT CTTCGACGAG ATGACCCAGA CGCAGATTGC CGAACGCATG GGCTATTCGC AGATGCACGT GTCCAGACTG CTGGCCAAAG CGCTGGCCAC CTTGCGGGAC CAGGCGCTCA GCGACGGAAC GGCGGCCGAC TTCGTACCGT CGCGATCCGG CCGGGTCGCC TAG
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Protein sequence | MSEPRREYSD VPNMIRALRQ LDPASPEYRR LHERIIAMTL PLAQHTARRF RGRGQSHDDL FQVASVGLVN AVKRFDPDSG SDFLAYAVPT IMGEVRRYFR DCSWAVKVPR RLKDLNSQLA KARAELTQQL GRAPTPSEVA AHLGIDREEV VQATIASSNY ATLSTDSTSG PDGDFVALRE TLGEPDARLD AVVDNETIRP LIEKLPPREQ AVLKLRFFDE MTQTQIAERM GYSQMHVSRL LAKALATLRD QALSDGTAAD FVPSRSGRVA
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