Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_3871 |
Symbol | |
ID | 4975187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 4136580 |
End bp | 4137608 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640458095 |
Product | FliA/WhiG family RNA polymerase sigma factor |
Protein accession | YP_001135131 |
Protein GI | 145224453 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0733317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGAC TCCGGCGTGA CCTCATTGGC CTGATGCCAA CGCAAGTGAG CGGTTACTCA GCGTTTCGCG TGTGCTACGC CTTCCCGGCC CGGAAAGCCG GAACGACAGC ACATCGGTCC ACCGCCGCCG GATGTCCCAG TTCGACCGAC GGACCCCGGA CCGACCCGCG AGACGTGCTC GACACGGAAG CCGTGATTCC AGTGCACACC CAGACTCTTT CACCTCCCGC CCGCACCGCC TCCCCGCGCA AGCGGGACGG ATACGACGAC GTCCTGGACA TGTTCCGCGA ACTGGCCGTC CTCGACCGCG ACTCAGCGGC GTTCCGGCGG CAGCGCGAGG CCATCATTGC CCGCTGCCTC CCCCTGGCCG ATCACATCGC GCGACGGTTC CGAGGCCGTG GCGAAGGCCA CGAGGACCTC GTCCAGGTCG CCCGCGTGGG ACTGCTGAAC GCCGTCAACC GATTCGACGT CGACAGCGCG AACGATTTCC TGGCGTTCGC GGTCCCCACC ATGATGGGCG AGGTCCGGCG ATACTTCCGC GACCACGGAT GGTCGCTCAA GGTCCCGCGA CGTCTCAAGG AACTCAATGT GCGACTCAAC GCGGCGCGCG CCGACCTGAC CCAGGAGCTC AACCGCGCGC CCACTCCCAG CGAGCTCGCC AAGTATCTGG GGATCGACCG CGAAGAGGTC GTCGAGGGGC TGGTGGCGGC CAATGCGTAC TCCACGCGGT CGACCGAACA GCCGACGACG TTCAGCGGAG ACGGCGAGGG ATTGTCGCTG CAGGACACCT TCGGAGCTCC CGATGACAAC ATCCAGAAGG TCATCGACGT CAACACCGTG CAGCCACTGC TGGCGGCGCT GCCCGAGAGG GACCGCCTCG TGCTGAAGCT GCGCTTCTTC GAGGACAGGA CCCAGAGCCA GATCGCCGAG CAGATCGGTG TCTCCCAGAT GCACGTGTCG AGGCTGCTGG CCCGCGCCCT GGCGACGCTG CGCGATCAGG TAGGCGACGA GCCGGCGACG CACTCCTGA
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Protein sequence | MSRLRRDLIG LMPTQVSGYS AFRVCYAFPA RKAGTTAHRS TAAGCPSSTD GPRTDPRDVL DTEAVIPVHT QTLSPPARTA SPRKRDGYDD VLDMFRELAV LDRDSAAFRR QREAIIARCL PLADHIARRF RGRGEGHEDL VQVARVGLLN AVNRFDVDSA NDFLAFAVPT MMGEVRRYFR DHGWSLKVPR RLKELNVRLN AARADLTQEL NRAPTPSELA KYLGIDREEV VEGLVAANAY STRSTEQPTT FSGDGEGLSL QDTFGAPDDN IQKVIDVNTV QPLLAALPER DRLVLKLRFF EDRTQSQIAE QIGVSQMHVS RLLARALATL RDQVGDEPAT HS
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