Gene Mflv_3871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3871 
Symbol 
ID4975187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4136580 
End bp4137608 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content67% 
IMG OID640458095 
ProductFliA/WhiG family RNA polymerase sigma factor 
Protein accessionYP_001135131 
Protein GI145224453 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0733317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGAC TCCGGCGTGA CCTCATTGGC CTGATGCCAA CGCAAGTGAG CGGTTACTCA 
GCGTTTCGCG TGTGCTACGC CTTCCCGGCC CGGAAAGCCG GAACGACAGC ACATCGGTCC
ACCGCCGCCG GATGTCCCAG TTCGACCGAC GGACCCCGGA CCGACCCGCG AGACGTGCTC
GACACGGAAG CCGTGATTCC AGTGCACACC CAGACTCTTT CACCTCCCGC CCGCACCGCC
TCCCCGCGCA AGCGGGACGG ATACGACGAC GTCCTGGACA TGTTCCGCGA ACTGGCCGTC
CTCGACCGCG ACTCAGCGGC GTTCCGGCGG CAGCGCGAGG CCATCATTGC CCGCTGCCTC
CCCCTGGCCG ATCACATCGC GCGACGGTTC CGAGGCCGTG GCGAAGGCCA CGAGGACCTC
GTCCAGGTCG CCCGCGTGGG ACTGCTGAAC GCCGTCAACC GATTCGACGT CGACAGCGCG
AACGATTTCC TGGCGTTCGC GGTCCCCACC ATGATGGGCG AGGTCCGGCG ATACTTCCGC
GACCACGGAT GGTCGCTCAA GGTCCCGCGA CGTCTCAAGG AACTCAATGT GCGACTCAAC
GCGGCGCGCG CCGACCTGAC CCAGGAGCTC AACCGCGCGC CCACTCCCAG CGAGCTCGCC
AAGTATCTGG GGATCGACCG CGAAGAGGTC GTCGAGGGGC TGGTGGCGGC CAATGCGTAC
TCCACGCGGT CGACCGAACA GCCGACGACG TTCAGCGGAG ACGGCGAGGG ATTGTCGCTG
CAGGACACCT TCGGAGCTCC CGATGACAAC ATCCAGAAGG TCATCGACGT CAACACCGTG
CAGCCACTGC TGGCGGCGCT GCCCGAGAGG GACCGCCTCG TGCTGAAGCT GCGCTTCTTC
GAGGACAGGA CCCAGAGCCA GATCGCCGAG CAGATCGGTG TCTCCCAGAT GCACGTGTCG
AGGCTGCTGG CCCGCGCCCT GGCGACGCTG CGCGATCAGG TAGGCGACGA GCCGGCGACG
CACTCCTGA
 
Protein sequence
MSRLRRDLIG LMPTQVSGYS AFRVCYAFPA RKAGTTAHRS TAAGCPSSTD GPRTDPRDVL 
DTEAVIPVHT QTLSPPARTA SPRKRDGYDD VLDMFRELAV LDRDSAAFRR QREAIIARCL
PLADHIARRF RGRGEGHEDL VQVARVGLLN AVNRFDVDSA NDFLAFAVPT MMGEVRRYFR
DHGWSLKVPR RLKELNVRLN AARADLTQEL NRAPTPSELA KYLGIDREEV VEGLVAANAY
STRSTEQPTT FSGDGEGLSL QDTFGAPDDN IQKVIDVNTV QPLLAALPER DRLVLKLRFF
EDRTQSQIAE QIGVSQMHVS RLLARALATL RDQVGDEPAT HS