| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3766 |
|---|
| Symbol | |
|---|
| ID | 4975082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 4016194 |
|---|
| End bp | 4017534 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640457990 |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_001135026 |
|---|
| Protein GI | 145224348 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.369587 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGACA GCCTGTTCGA CGTGCCCGGG GAGCCCGCGC CGCCCGCCGC GGGGCCCGTC
GGCGCGTCGG TTCCGCTGGC GGTGCGCATG CGTCCGGCGA ACCTCGACGA GGTCGTCGGC
CAGGACCACC TGCTCAAGCC CAACTCGCCA CTGCGCCGCC TCATCGAGGG TTCCGGCGCG
GCGTCGGTGA TCCTGTACGG CCCGCCCGGC ACCGGCAAGA CCACGCTCGC CTCGATGATC
TCCCAGGCCA CCGGACGCCG GTTCGAGGCG CTGTCCGCGC TGGCGGCGGG GGTCAAGGAA
GTGCGCGCCG TCATCGATGT GGCCCGCCAG GCCGCGGTGC GCGGCGAGCA GACCGTGCTG
TTCATCGACG AGGTGCACCG GTTCTCCAAG ACCCAGCAGG ACGCGCTGCT GGCCGCGGTC
GAGAACCGGG TGGTGCTGCT GGTCGCGGCC ACCACCGAGA ACCCGTCGTT CTCCGTCGTC
GCACCGCTGC TGAGCCGATC GCTGATCCTG CAACTGCAAC CGTTGACCCC GGCCGACGTC
ACGACGGTGA TCCGCCGCGC GATCACCGAC GAGCGCGGCC TGGGTGGCAG GGTGACCGTC
AGCGACGACG CCATCGAGCA ACTGGTGCTG TTGTCCGCCG GCGATGCCAG GCGCGCCCTG
ACCGCGTTGG AGGTCGCCAC AGAAACAGTC TCCGAGTCGG GCGAGACGGT GACCGTCGAG
GTGATCGAGC AGTCGCTGGA CAAGGCGGCG CTGCGGTATG ACCGCGACGG CGATCAGCAC
TACGACGTCG TCAGCGCGTT CATCAAGTCG GTGCGCGGGT CCGACGTCGA CGCCGCCCTG
CACTATCTGG CCCGGATGCT GGTCGCGGGG GAGGACCCGC GGTTCGTCGC CCGCAGGCTG
ATGATCCTCG CCAGCGAGGA CATCGGGATG GCCGACCCCA CCGCGCTGCA GATCGCGGTC
GCGGCCGCGC AGACGGTCCA GCTGATCGGG ATGCCGGAGG CGCAGCTGAC GCTCGCGCAG
GCGACCGTGC ACCTGGCGAC GGCGCCCAAG TCCAACGCGG TCACCACCGC ACTCGGGGCG
GCGATGGCCG ACATCCGGGC GGGCAAGGCG GGCCAGGTGC CGGCACACCT GCGCGACGGG
CATTACTCGG GGGCGCAGAA GCTGGGCAAC GCGGTGGGCT ACAAGTACGC CCACGACCAT
CCCGGCGGCG TTGCGTCACA ACAGTATCCG CCCGACGAGC TGGTCGGTAC CGACTACTAC
CGGCCGACCA ACCACGGTGT CGAGCGTGAG ATCTCGGCGC GTGTGGAGAA GCTGCGCGCG
ATCATCCGCC GTTCGCGCTG A
|
|---|
| Protein sequence | MSDSLFDVPG EPAPPAAGPV GASVPLAVRM RPANLDEVVG QDHLLKPNSP LRRLIEGSGA
ASVILYGPPG TGKTTLASMI SQATGRRFEA LSALAAGVKE VRAVIDVARQ AAVRGEQTVL
FIDEVHRFSK TQQDALLAAV ENRVVLLVAA TTENPSFSVV APLLSRSLIL QLQPLTPADV
TTVIRRAITD ERGLGGRVTV SDDAIEQLVL LSAGDARRAL TALEVATETV SESGETVTVE
VIEQSLDKAA LRYDRDGDQH YDVVSAFIKS VRGSDVDAAL HYLARMLVAG EDPRFVARRL
MILASEDIGM ADPTALQIAV AAAQTVQLIG MPEAQLTLAQ ATVHLATAPK SNAVTTALGA
AMADIRAGKA GQVPAHLRDG HYSGAQKLGN AVGYKYAHDH PGGVASQQYP PDELVGTDYY
RPTNHGVERE ISARVEKLRA IIRRSR
|
|---|
| |